Pairwise Alignments

Query, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., 60 kDa inner membrane insertion protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  224 bits (571), Expect = 7e-63
 Identities = 182/608 (29%), Positives = 275/608 (45%), Gaps = 86/608 (14%)

Query: 1   MDSQRNILL-IALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAP------------APS 47
           M  QRN++L I L++     F+ +  AK P   A QQ  +  AAP            AP 
Sbjct: 1   MLQQRNLILAIVLSMAVLFGFEYFFGAKQPPMTAQQQDSAQMAAPSNGQMAAPSSVQAPG 60

Query: 48  FSDELDP-TPAQNVAAK-----------------------AKTITVSTDVLTLSIDTLGG 83
            S    P  PAQ  AA                        +  I + T  L  SI   G 
Sbjct: 61  QSPVAAPQVPAQPGAAVPTPGGMTPGAASLSREEALAADISPRIGIDTARLHGSIRLRGA 120

Query: 84  DVVSAKLNQYSEELN--SPESFVLLQNTQGHQFIAQSGLV-GPQGIDVTSNNRPAYQVSA 140
            +    L  Y E ++  SPE  +L        + A+ G V G  G+ V           A
Sbjct: 121 RIDDLSLVDYRETVDPQSPEISLLSPPGAPLPYYAEFGWVAGTPGVKVPD---------A 171

Query: 141 DSFTLAE-GQDELRIPMTY---QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGM 196
           D+   A+ G   +  P+T       G+ + +   +    +   +   V N      TL  
Sbjct: 172 DTLWQADRGALGVDAPVTLTWDNGEGLRFIRKIAIDH-DFMFSITQAVENTGAGAVTLFP 230

Query: 197 YAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQ 256
           Y  + +  +++   L       G     D   K+  +  +KD      +  T  W+ +  
Sbjct: 231 YGLVSR--INTPALLNYYILHEGPLGVFDGTLKEVKYSALKDDG-EVKHTSTGGWMGITD 287

Query: 257 HYFASAWIPRDEPQAQ---LYSRVINNLG-DMGIRTPNKTIANGDKAEFEATLWVGPK-- 310
            Y+ +A +           LY       G          T+  G + E    L+ G K  
Sbjct: 288 KYWLTALVTDQSMPVTGRFLYQPRDGRDGYQADFLGAAFTVEPGGRIETSNHLFSGAKEV 347

Query: 311 -LQDQMAATA--PNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAM 367
            L D+        N DL +D+GW +F+ KP    +  +   +GN G+AI+  T +++   
Sbjct: 348 KLLDRYTDELGIKNFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMGLAILAFTVVLKLVF 407

Query: 368 YPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQ 427
           +PL    Y SM+KM++LQP+L+ ++ER  DDR R++QEMM LYKKE+VNPL GCLPI++Q
Sbjct: 408 FPLANKSYRSMSKMKLLQPELKKLQERFKDDRARLNQEMMSLYKKEQVNPLSGCLPIVIQ 467

Query: 428 MPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYIL-------------------PLL 468
           +P+F ALY  L  S+E+RH PF+GWI DL+A DP  +                    PL+
Sbjct: 468 IPVFFALYKVLFVSIEMRHEPFYGWIRDLAAPDPTTVFNLFGLIPWDPPNMLMLGAWPLI 527

Query: 469 MGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTL 528
           MG +M++ QK++PT   DP Q KIM F+P+MFTF    F +GLV+YW  +N++++ QQ +
Sbjct: 528 MGVTMWMQQKLNPTP-ADPTQAKIMMFLPIMFTFMLAHFAAGLVIYWTWNNLLSITQQWV 586

Query: 529 IYKALEKK 536
           I K +  K
Sbjct: 587 IMKRMGAK 594