Pairwise Alignments

Query, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., inner membrane protein OxaA from Phaeobacter inhibens DSM 17395

 Score =  246 bits (627), Expect = 2e-69
 Identities = 186/597 (31%), Positives = 279/597 (46%), Gaps = 81/597 (13%)

Query: 1   MDSQRNILLIALALVSFLLFQQWQVA-KNPAPQATQQAQSTGAAPAPSF----------- 48
           MD Q   LL+A AL SFL+   W V    P PQ    A     APA              
Sbjct: 1   MDDQNKNLLLATAL-SFLVILGWYVFFPPPEPQPQPDAVVAETAPAGDVVSAPAAASPAA 59

Query: 49  -SDELDPTPAQNVAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQ 107
            S+    T     AA A  + + T  ++ +I  LGG +    L  Y   L    + V + 
Sbjct: 60  GSEGAAVTAEAETAADAPRLAIETPRVSGTISLLGGRLDDLSLKDYRVSLEEDAAIVKML 119

Query: 108 NTQG--HQFIAQSGLVGPQGI---DVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQ-AN 161
           +  G  + + A  G     G+   DV   N   +Q   D+    +      + +T+    
Sbjct: 120 SPAGDPNAYYALYGWAPGAGLGPDDVPGANT-LWQAGGDATLTPDSP----VTLTWDNGK 174

Query: 162 GIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTY---RG 218
           G+ + +T  + +  Y   +   V N SG+   L  Y  L ++    G    +  +     
Sbjct: 175 GLTFNRTIAVDQ-DYLFTITQSVTNASGNTVALAPYGTLARH----GEPQDLKNFFILHE 229

Query: 219 GAYSTSDVRYKKYSFDDMKDRNLSAPNDV--------TVNWVAMIQHYFASAWIPRDEPQ 270
           G    +D    +  +DDM D  + A +          T  W+    HY+ S  +P  EP 
Sbjct: 230 GVIGMADGTLAEIDYDDMTDFEVDARSGARAEVTQVETNGWIGFTDHYWMSTLVP--EP- 286

Query: 271 AQLYSRVIN-----NLGDMGIRTPNKTIANGDKAEFEATLWVGPKLQDQMAATAPN---- 321
            Q +  +        +    I  P  T+A+G+ +E    L+ G K    +     +    
Sbjct: 287 GQAFRSIAKFDERREIYQTDIVLPTVTVADGETSEATTMLFAGAKEWATIRGYQKDGIEG 346

Query: 322 -LDLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAK 380
            LD + D+GW +F+ KP+  +L  +   +GN G AII LT +++  ++PL    Y SMAK
Sbjct: 347 FLDSI-DWGWFFFLTKPIFAVLHWLNALIGNMGWAIIGLTVLIKLLVFPLAYKSYASMAK 405

Query: 381 MRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALME 440
           M+ LQP+++ ++E+ GDDRQ++ QEMM LYKKEKVNP  GCLPIL+Q+PIF +LY  +  
Sbjct: 406 MKELQPRMEEIKEKAGDDRQKLQQEMMALYKKEKVNPAAGCLPILIQIPIFFSLYKVIFV 465

Query: 441 SVELRHSPFFGWIHDLSAQDP-------------------------YYILPLLMGASMFV 475
           ++ELRH+PFFG   DLSA DP                           ILP+L+G SM++
Sbjct: 466 TLELRHAPFFGPFQDLSAPDPTSIMNLFGLLPMAAPVEGTLMATIFIGILPILLGISMWL 525

Query: 476 IQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYKA 532
            QK++P   TDP QQ I  +MP +F F    F SGLV+YW+ +N +T  QQ LI ++
Sbjct: 526 QQKLNPAP-TDPTQQMIFAWMPWVFMFMLGGFASGLVVYWIANNTITFTQQYLIMRS 581