Pairwise Alignments

Query, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., inner membrane protein translocase component yidC from Caulobacter crescentus NA1000

 Score =  221 bits (564), Expect = 5e-62
 Identities = 180/608 (29%), Positives = 278/608 (45%), Gaps = 96/608 (15%)

Query: 2   DSQRNILLIALALVSFLLFQQWQV---------AKNPAPQATQQAQSTGAAPAPSFSDEL 52
           +  +N L+  ++  + L+  Q+ V         A+  A +A +Q  +  A      +   
Sbjct: 3   NDNKNTLMFIVSAFAILIGYQFFVLGPQQKKAEAEFRAKKAAEQQSAAKAGVTLDANGNP 62

Query: 53  DPTPAQNVAAKAKT--ITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQ 110
            P      AAKA +  I V T  L+ SI   G  +    L +Y E        V L   +
Sbjct: 63  APLRLSRDAAKALSPRIEVDTPALSGSIALKGARIDDLFLRKYDETTKKDSPPVELFRPE 122

Query: 111 G--HQFIAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQ---DELRIPMTYQANGIDY 165
           G  H + A  G  G         N P    S   +T A GQ       + +TY  NG+  
Sbjct: 123 GAEHAWFADFGWAGA--------NLPGLPDSRTVWTAAPGQVLRPNSPVTLTYD-NGLGL 173

Query: 166 TKTFILKRGSYAVDVVFDVANNSGSEAT-LGMYAHL-RQNLLDS-GGNLAMPTYRGGAYS 222
           T T ++     A+  V D   N+G+    L  YA + RQ + D+ G N  +     G   
Sbjct: 174 TFTRVIAVDDQAMFTVTDSVKNNGTNGLQLAPYATVQRQGISDALGKNQIVHEGAIGVLG 233

Query: 223 TSD------VRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSR 276
            +D       +Y K+     KD+ L + + V   W  +   Y+ +A IP      +   R
Sbjct: 234 ATDEQKLEMAKYGKWK----KDKPLQSFDSVG-GWTGITDKYWLAALIPGQNQAIKAQYR 288

Query: 277 V----------INNLGDMGIRTPNKTIANGD-------------KAEFEAT----LWVGP 309
           V          +N LG + +  P  T++                K E+ AT    +W   
Sbjct: 289 VTNVAGIDVYDVNFLGPVQVLNPGATVSQTTRLFAGAKTVPLLRKYEYGATPAPAIW--- 345

Query: 310 KLQDQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYP 369
           +  ++  A  P  D  VD+G   F  +P+  +L V    VGN+G+AI+ LT +++  +YP
Sbjct: 346 EFWNKTKAEIPRFDDAVDWGMFRFFTRPIFNILEVFYKLVGNFGLAILLLTVVLKLVLYP 405

Query: 370 LTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMP 429
           +    Y SMAKM+ + P+++ ++ +  DD  +  QEMM LY+KEK+NP+ GCLP+L+Q+P
Sbjct: 406 MADKSYESMAKMKKIAPEVEKLKAKHKDDPAKQQQEMMALYQKEKINPMMGCLPMLIQIP 465

Query: 430 IFIALYWALMESVELRHSPFFGWIHDLSAQDP--------------------------YY 463
           +F ALY  L  ++E+RH+PFFGWI DLSA DP                            
Sbjct: 466 VFYALYKVLTVTIEMRHAPFFGWIQDLSAPDPTTMFNLFGLIPWDPGSLPLIGAMIAHLG 525

Query: 464 ILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTL 523
           + PLL G +M++   M+P    DP+QQKI  + PV+FTF    F  GLV+YW  SN++T+
Sbjct: 526 VWPLLYGFTMWLTTAMNPPA-GDPIQQKIFQWFPVIFTFTLSGFAVGLVIYWCWSNVLTI 584

Query: 524 IQQTLIYK 531
            QQ +I +
Sbjct: 585 FQQYIIMR 592