Pairwise Alignments

Query, 453 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., tRNA modification GTPase MnmE from Phaeobacter inhibens DSM 17395

 Score =  245 bits (626), Expect = 2e-69
 Identities = 166/454 (36%), Positives = 244/454 (53%), Gaps = 29/454 (6%)

Query: 4   DTIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYLP-FTDEDGQQLDQGI 62
           DTI A A+A G+ GV +IR+SGP A   A  ++G  L PR    L   +D  G ++D+ +
Sbjct: 2   DTIFALASAQGKAGVSVIRLSGPKAISTASVISGGDL-PRPGRVLRVLSDCSGARIDEAL 60

Query: 63  ALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARPGEFSERAFLNDKMDL 122
            L F  P+SFTGED +E Q HG   V+  ++  + Q + VR + PGEF+ RA  N K+DL
Sbjct: 61  LLTFTGPNSFTGEDTVEFQVHGSTSVVSAMLDLLGQFEDVRLSDPGEFTRRALENGKLDL 120

Query: 123 TQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYVEAAIDFPEEEIDF 182
           +Q EA+ADLIDA +E     A   L G  +       + LI     +E  IDF +E++  
Sbjct: 121 SQVEALADLIDAETEAQRVQAQAVLAGGLADLAERWRKDLIRAASLIEVTIDFADEDVPV 180

Query: 183 LADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKESAI 242
               +V   L  +  +L            +R G +V I G PN GKS+LLNAL+G+E+AI
Sbjct: 181 DVTKEVKELLAGVTADLEPQIAGVKMAERIRSGFEVAIIGAPNVGKSTLLNALAGREAAI 240

Query: 243 VTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLFMV 302
            ++ AGTTRDV+   + + G+P+ ++DTAGLR+  D VE IGI+ A E   +AD  +F+ 
Sbjct: 241 TSEYAGTTRDVIEVRMDLAGLPVTLLDTAGLRETDDHVEGIGIKMAKERAEKADLRVFLT 300

Query: 303 DGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQPTLIRLSAKTGQ 362
           +  T  A D        +D   ++I   V+  KAD  G+      V Q     +S KTGQ
Sbjct: 301 EDRT--AID--------IDISEDDI---VVAPKADLVGD-----GVPQKA---VSGKTGQ 339

Query: 363 GVDALRQHLKECMGFSGNQEG--GFMARRRHLDALERAAEHLAIGQQQLE-GYMAGEILA 419
           G+D L   + + +    N+ G  G   R RH + ++ A + L   Q  L  G    ++ A
Sbjct: 340 GIDMLIADITKVL---RNRAGKVGIATRARHRETMKTAYDRLQSAQDVLRYGPEFYDVAA 396

Query: 420 EELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453
           E++R A + L  + G    ++LL  IFSSFC+GK
Sbjct: 397 EDMRSAIRSLEMLVGRVGVENLLDEIFSSFCLGK 430