Pairwise Alignments

Query, 453 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., tRNA modification GTPase TrmE from Dechlorosoma suillum PS

 Score =  426 bits (1094), Expect = e-123
 Identities = 239/458 (52%), Positives = 303/458 (66%), Gaps = 19/458 (4%)

Query: 3   TDTIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYLPFTDEDGQQLDQGI 62
           TD I A ATAPGRGGVG++R+SG     +A+ +TGR  RPR+A    F   DG  +D G+
Sbjct: 5   TDPIAAIATAPGRGGVGVVRISGSGLLPLAEQLTGRLPRPRHATLADFRAADGSVIDSGL 64

Query: 63  ALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARPGEFSERAFLNDKMDL 122
            LFFPNP SFTGEDVLELQGHGGPVV+ ML+ R L + G R A PGEF+ RAFLN K+DL
Sbjct: 65  LLFFPNPSSFTGEDVLELQGHGGPVVLQMLLARCLDL-GARLAEPGEFTRRAFLNGKLDL 123

Query: 123 TQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYVEAAIDFPEEEIDF 182
            QAEA+ADLIDA+++ AA+SA++SLQGEFS+ I  L + LI LR   EA +DFPEEEIDF
Sbjct: 124 AQAEAVADLIDATTQAAARSAVRSLQGEFSREIRVLTDELIELRALTEATLDFPEEEIDF 183

Query: 183 LADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKESAI 242
           L        L ++   L AV   A QG +++ G+ VV+AG+PN GKSSLLN L+G E AI
Sbjct: 184 LKAANAFGRLDSLAARLEAVFDRARQGRLLQNGLHVVLAGQPNVGKSSLLNGLAGDELAI 243

Query: 243 VTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLFMV 302
           VT IAGTTRDV+R ++ I+G+PLH+IDTAGLR+  D VE++GIER W EI +AD ++ + 
Sbjct: 244 VTPIAGTTRDVVRGNLQIEGIPLHVIDTAGLRETEDEVERLGIERTWREIEKADVLVLLA 303

Query: 303 DGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTG-------EPLGICHVNQPTLIR 355
           D     A   + I    + +LP ++    + NK D T        EP G         I 
Sbjct: 304 DAREGIAHGEEAI----LRRLPPDLPRITVYNKIDLTDRAPERHEEPEG---GEGCVAIS 356

Query: 356 LSAKTGQGVDALRQHLKECMGFSGNQEGGFMARRRHLDALERAAEHLAIGQQQLEGYMAG 415
           LSAK+G G+D LR+ L    G+    E  F+AR RHL AL  A EHL + +Q+L    A 
Sbjct: 357 LSAKSGAGLDLLRRELLRIAGWH-EAEDVFIARERHLRALAAAQEHLQLSRQRLP---AL 412

Query: 416 EILAEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453
           E+ AEELR+AQ  L  ITGEF++DDLLG IF  FCIGK
Sbjct: 413 ELFAEELRLAQNALCHITGEFTADDLLGEIFGRFCIGK 450