Pairwise Alignments

Query, 453 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., tRNA modification GTPase TrmE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  662 bits (1707), Expect = 0.0
 Identities = 328/453 (72%), Positives = 387/453 (85%)

Query: 1   MTTDTIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYLPFTDEDGQQLDQ 60
           +TTDTIVAQATAPGRGGVGIIR+SG  A +VA  V G   +PRYA+Y  F    GQ +DQ
Sbjct: 5   VTTDTIVAQATAPGRGGVGIIRISGDKATNVAMAVLGHLPKPRYADYCYFKSASGQVIDQ 64

Query: 61  GIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARPGEFSERAFLNDKM 120
           GIALFF  P+SFTGEDVLELQGHGG +V+DMLI+R+L+++G+R A+PGEFSE+AF+NDK+
Sbjct: 65  GIALFFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVLEVEGIRIAKPGEFSEQAFMNDKL 124

Query: 121 DLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYVEAAIDFPEEEI 180
           DLTQAEAIADLIDA+SEQAAKSALQSLQGEFSK +H LV+ + HLR+YVEAAIDFP+EE+
Sbjct: 125 DLTQAEAIADLIDATSEQAAKSALQSLQGEFSKEVHELVDQVTHLRLYVEAAIDFPDEEV 184

Query: 181 DFLADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKES 240
           DFL+DGK++  L  IID L AV+  A QG+I+REGMKVVIAGRPNAGKSSLLNAL+GKES
Sbjct: 185 DFLSDGKIANALYKIIDKLIAVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGKES 244

Query: 241 AIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLF 300
           AIVT+IAGTTRDVLREHIH+DGMPLHIIDTAGLRD +D VE+IGIERAW EI  ADRVLF
Sbjct: 245 AIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDTVEQIGIERAWNEINSADRVLF 304

Query: 301 MVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQPTLIRLSAKT 360
           MVDGTTT A DP DIWPDF+++LP N+G+TVIRNKAD TGE L +      ++ R+SAKT
Sbjct: 305 MVDGTTTTAVDPHDIWPDFINRLPTNLGVTVIRNKADLTGENLEMTEEKGYSVYRISAKT 364

Query: 361 GQGVDALRQHLKECMGFSGNQEGGFMARRRHLDALERAAEHLAIGQQQLEGYMAGEILAE 420
           G GVD L+QHLK  MG+  N EGGF+ARRRHL+ALE AA HL +G++QLE Y+AGE+LAE
Sbjct: 365 GLGVDELKQHLKSLMGYQSNLEGGFIARRRHLEALEIAASHLQLGKEQLEVYLAGELLAE 424

Query: 421 ELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453
           ELR+AQ  L+EITG F+SDDLLG+IFSSFCIGK
Sbjct: 425 ELRMAQLALSEITGRFTSDDLLGKIFSSFCIGK 457