Pairwise Alignments

Query, 290 a.a., chromosome segregation DNA-binding protein from Pseudomonas syringae pv. syringae B728a

Subject, 296 a.a., putative chromosome partitioning protein parB (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  214 bits (545), Expect = 2e-60
 Identities = 123/295 (41%), Positives = 186/295 (63%), Gaps = 16/295 (5%)

Query: 1   MAVKKRG-LGRGLDALLSSPTVSSLEEQAVKAPPSELQHVPLDLIQRGKYQPRRDMDPQA 59
           MA +KR  LGRGLDALLS   V +          S +  + L  I     QPRR+ D  A
Sbjct: 1   MATQKRNALGRGLDALLSMDDVKT-------EGSSSISEIELAKITVNPNQPRREFDQTA 53

Query: 60  LEELAQSIKSQGVMQPIVVRPIGDNRFEIIAGERRWRASQQAGVETIPAMVRDVPDETAI 119
           L+ELA SI   G++QPI +R + D+ ++IIAGERR+RASQ+AG++TIPA +R   DE  +
Sbjct: 54  LQELADSIAEIGIIQPITLRKLSDDEYQIIAGERRYRASQKAGLKTIPAYIRTADDENMM 113

Query: 120 AMALIENIQREDLNPIEEAMALQRLQQEFQLTQQQVADAVGKSRVSVANLLRLIALPEAI 179
            MALIENIQREDLN +E A+A Q L  +++LTQ+++++ +GK+R ++AN LRL+ LP  I
Sbjct: 114 EMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTIANYLRLLKLPAPI 173

Query: 180 KTMLSHGDLEMGHARALLGLGEDR-QVEGARHVVARGLTVRQTEALVRQWLSGKAEAAEP 238
           +  L +  L+MGHARAL+ LG+ + QV+    +   G +VR+ E +V+    G+A  +  
Sbjct: 174 QMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKSGT 233

Query: 239 VKTDPDISR-------LEQRLAERLGSAVQIRHGQKGKGQLVIRYNSLDELQGVL 286
            K  P  S+       L+Q+L     + VQ+   +KGKG++ I +++ +EL+ ++
Sbjct: 234 RKITPKRSKLPEEFNLLKQQLTGFFNTKVQLTCSEKGKGKISIPFSNEEELERIM 288