Pairwise Alignments

Query, 288 a.a., transcriptional regulator, RpiR family from Pseudomonas syringae pv. syringae B728a

Subject, 287 a.a., DNA-binding transcriptional regulator HexR from Pseudomonas sp. BP01

 Score =  219 bits (559), Expect = 4e-62
 Identities = 121/276 (43%), Positives = 174/276 (63%)

Query: 2   NLLQHIAQSRNLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGCT 61
           NLL+ I    + L K+E KVA+ +LL+P      S+A LA +  +SEPT+ RFCR+ G +
Sbjct: 3   NLLEQIQGRLDELNKAERKVAEVILLNPQQATRFSIAALAQAAKVSEPTVNRFCRSFGVS 62

Query: 62  GFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVRENLDPHALQLA 121
           G+ +LKL+LAQSLA+GA++   A+  DD  A Y+ KIF + + +L    + LDP  +  A
Sbjct: 63  GYPELKLQLAQSLASGAAYVSRAVEADDDPAAYTQKIFASAIASLDGACQLLDPQQVSRA 122

Query: 122 VTAMAGANRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVC 181
           V  M  A ++ F+G GAS  VA DAQHKFFR  L  +A++D  MQ M A      D+ V 
Sbjct: 123 VDMMIQARQIHFFGLGASAPVALDAQHKFFRFNLAVSAHADVLMQRMLASVAHTGDLFVI 182

Query: 182 ISQSGRSKDLLITANLVRESGATLITLCPSQTPLAELSSVNLAIDVHEDTEIYTPLTSRI 241
           IS +GR+++L+  A L RE+GA+++ L  + +PLA   S++L I + EDT+IY P+TSRI
Sbjct: 183 ISYTGRTRELVEVARLARENGASVLGLTAAGSPLANACSLSLHIPLPEDTDIYMPMTSRI 242

Query: 242 AHLVVIDVLAMGVAMARGPGLVNHLKSVKRSLRGLR 277
             L V+DVLA G+ + RG     HL+ +K SL   R
Sbjct: 243 IQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNASR 278