Pairwise Alignments

Query, 171 a.a., RHS protein from Pseudomonas syringae pv. syringae B728a

Subject, 1456 a.a., type IV secretion protein Rhs from Pseudomonas fluorescens SBW25-INTG

 Score =  143 bits (361), Expect = 1e-38
 Identities = 67/126 (53%), Positives = 85/126 (67%), Gaps = 5/126 (3%)

Query: 11   KVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEKLVVNEV---EQNLRFQGQYFDVE 67
            K+ Y+H D  G P ++T+A+G  VWQA YR WG   + V       EQNLRFQGQY D E
Sbjct: 1230 KIRYYHNDLNGLPEQLTEADGHAVWQATYRVWGNTLEEVREPYYIEEQNLRFQGQYLDRE 1289

Query: 68   TGLHYNTFRYYDPEIGRFITQDPIGLLGGFNLYGYAPSPTGWVDPYG--LCKSSSSGAKG 125
            TGLH+NTFR+YDP++GRF T DPIGL G  NLY YAP+P  W+DP+G   C +++  +K 
Sbjct: 1290 TGLHFNTFRFYDPDVGRFTTPDPIGLDGELNLYQYAPNPIAWIDPWGWKTCGAANGNSKQ 1349

Query: 126  VNKATH 131
             NK  H
Sbjct: 1350 NNKMNH 1355