Pairwise Alignments

Query, 356 a.a., Protein of unknown function DUF1305 from Pseudomonas syringae pv. syringae B728a

Subject, 338 a.a., type VI secretion system baseplate subunit TssG from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (275), Expect = 5e-29
 Identities = 88/327 (26%), Positives = 144/327 (44%), Gaps = 26/327 (7%)

Query: 14  DQARAEP-------HRFEFFQLVRLLRLHYSRNGRMDLETRPHEDPLRFRSQLSLNFPAS 66
           D A+A P         + F+QLV LL+     N   + E    +  L F +  SL F  S
Sbjct: 15  DPAQASPLSLPGNVREYNFYQLVELLQKLADINP--ESEEWERDCRLVFSANPSLGFSPS 72

Query: 67  EVSDLQFEREGKLSAAGLPLSEVQVTFMGLVGPSGVLPRPYTELLIDRHIQYRDDAAHAF 126
           +V  L+   + +          +   F GL G    LP    E L+             F
Sbjct: 73  DVMALEARDDERWV--------MLTNFFGLSGAQSPLPGFILEQLVTEE---PGGYKQPF 121

Query: 127 LDIFSHRMTTLFYEAWQKYKFYIEYERNGTSNFDRYLLNLVGFGPEGLKQKFDKGESPLR 186
           LD F++R+  L Y  W+KY++Y+ ++      F   L  LVG G   L+     GE+P+ 
Sbjct: 122 LDFFNNRLINLVYRVWRKYRYYVRFQPGAQDVFSAQLFALVGLGDPDLR-----GETPIN 176

Query: 187 RELFSYFSGMFAQKPRNALNLEVMLSFYFSLP-FKIQQFAGRWLKLDSSQCTQLGRKNAV 245
                 ++G  A + R+   +  +++  F LP   I+Q+  R + +D SQ   LG++NA 
Sbjct: 177 WCKMLAYAGTLAGRSRSPQVVAGIIAHCFDLPDVSIRQWVRRRVSIDRSQQLALGKQNAR 236

Query: 246 LGQSAVAGNRVWDYQSCVRIEMGPLELADYQRFQPGTEDYQKLVELVRFYIGAELDFQIA 305
           LG   V G  V D      I +  L  + +  F P  ++YQ L +LV F +  ++ + + 
Sbjct: 237 LGMDTVIGESVIDCSGKFIICIKRLSRSRFADFLPSGKEYQPLCKLVEFILREQMAYDLE 296

Query: 306 PELKREAVPVARLGRQGNVSLGWLGWL 332
             +     P+  L  + N++LGW  +L
Sbjct: 297 LAMDEREAPLFCLDTRQNIALGWTSFL 323