Pairwise Alignments

Query, 610 a.a., protein of unknown function DUF879 from Pseudomonas syringae pv. syringae B728a

Subject, 590 a.a., type VI secretion system, VCA0110 from Marinobacter adhaerens HP15

 Score =  306 bits (785), Expect = 1e-87
 Identities = 202/619 (32%), Positives = 327/619 (52%), Gaps = 50/619 (8%)

Query: 8   YYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARVHKKLDDE 67
           +Y  ELS LR  G+EFA  +P++   L    +   DP  ERL+E F+FL+ ++ +K++DE
Sbjct: 6   FYRDELSFLRLQGREFADAHPQLTRFL---SEQSTDPDVERLLEGFAFLTGKLREKVEDE 62

Query: 68  FPEIVESFLEVLYPHYLRPTPSMSIVEFNMGKQEKVTESYRVARHTELHANPVDG----I 123
           FPEI  S L +L+P+YLRP PS +I+ F+  +   ++E  RV RHTE+ + P+       
Sbjct: 63  FPEITHSLLNMLWPNYLRPVPSCTIMRFD-PQLHAISERQRVERHTEIKSRPLGDANRQT 121

Query: 124 VCKFRTCYPVELWPIAVQSASFIEMERSAFNGHSADLIARLRIGLTATSDVLFGKMEMDS 183
            C+FRTC  V+++P++V +A+  E  R          ++ + + L   +D     + MDS
Sbjct: 122 QCRFRTCRAVDVFPVSV-AAAHAEHSRE---------VSSVTVDLALHTDQPLSSLGMDS 171

Query: 184 LRFFLDGESTLMHQLYELLFNNLAKATLSFEDEGRTREVVLPAGALKSVGYGLDEGLVDY 243
           LRF+L GES +   L+  L + L +  L   D        LPA  L+ VG+G +E L+ Y
Sbjct: 172 LRFYLGGESHVAETLFLWLNHYLKRIDLVVGD----AVYRLPASLLRPVGFGNEEALLPY 227

Query: 244 SERSFLGYRLLHEYFTFPDKFMFFDLSGFARILAGKEIGKVEINFYFSDYDLTDRLARLT 303
            + ++ GYR+L EY +FP+ F F D+ G  R L   +  ++ + F+FS      R+    
Sbjct: 228 PKNAYPGYRILQEYLSFPEAFRFVDILGLGRRLPALQADEISLRFHFS------RILPPD 281

Query: 304 QNVSRNNFKLNCTPIINLFRQQAEPIKLTHVQHEYAVTPDVRLQSSAEVVSIDRVR---R 360
             V  +NF+L CTP +NLF  + EP+ L   Q EY ++P  R     EV SI++V     
Sbjct: 282 AKVREDNFQLYCTPAVNLFTHEGEPVDLNGRQTEYRISPSSRSPDHYEVFSIEQVEGWLE 341

Query: 361 VKKINGNDQVGTCHPFFEPRGDQGPGQSFWIARRRPTQSRQSDGSNMFIRVVDRDLELID 420
            +   G  ++ T    F+   ++  G++    R R   S + DG + ++  V  D     
Sbjct: 342 GRSGRGEPRIYTPFESFQHEVERDRGRTALYYRVRARDSVRGDGFDHYMSFVRGDESECL 401

Query: 421 SNNDTLSIRLTCSNRDLPLMLPFGGE-RGDFNIPSNSVIKDIRCLRKPTATVRVPLGNGV 479
           S  + +S+ LTC+NR LP  L  G       + P+ +   +I    +PTAT+R  L   +
Sbjct: 402 SRQEAVSLTLTCTNRHLPSQLAVGEICMATESTPAFAAFSNI---TRPTATLRPTLDGSL 458

Query: 480 IWRLISHLSLNHMSLVSKGREVLLELLSLYNYRNV------SAIRKQINGIVSVSSEPVV 533
           +W LIS+LSLN++S++    + L  +L +Y++R +         +K++ GI  + + PV 
Sbjct: 459 LWTLISNLSLNYLSMLDV--DALRTVLRVYDFRALVDRQAERVSQKRLAGITCIETAPVD 516

Query: 534 ARI-GHPRPNFVRGVGITLKFDESQYTGSG-VFLFGMVLDHFFGQYCSMNSFTQLTLRTL 591
             + G P    VRG+   LK ++  +   G ++LFG VL  FF  Y S+N+F QL +   
Sbjct: 517 RMVKGLP----VRGIRSVLKLEQQAFASEGDLYLFGTVLSQFFALYASINAFHQLEVVNT 572

Query: 592 QREKRVVQWPPRTGDQPLV 610
             ++R   W  + G QPL+
Sbjct: 573 DNQERYT-WTLQQGQQPLM 590