Pairwise Alignments

Query, 322 a.a., Substrate-binding region of ABC-type glycine betaine transport system from Pseudomonas syringae pv. syringae B728a

Subject, 320 a.a., putative glycine betaine transport system, substrate binding protein from Phaeobacter inhibens DSM 17395

 Score =  129 bits (325), Expect = 7e-35
 Identities = 88/343 (25%), Positives = 155/343 (45%), Gaps = 47/343 (13%)

Query: 3   MKKALLTTLVSAGLLASAGASQAAGWCESGKPVKFAGLNWESAMLLTDVLQVILDKGYGC 62
           MK+ +L ++ + G+ A A       W E    V    ++W SA ++T V + ++++GYGC
Sbjct: 1   MKQLVLASVCALGMAAPA-------WAEDCGDVTITQMDWASANVVTSVAKFLMEQGYGC 53

Query: 63  TVDALPGNS-IAMENALGTNDIQIFAEEWVGRSEVWNKAAAAGKVVGVGAPIV-GAVEGW 120
           +V  +P ++  A+ +   T    I  E WV  +  +    A GK+V +   +  G +EGW
Sbjct: 54  SVTTVPSSTPTALTSVAETGTPDILTELWVNTAPAYADLVAEGKLVELADVLSDGGIEGW 113

Query: 121 YVPRYVIEGDAK-RKLEAKAPNLKSISDLAQYSAVFKDQEEPGKGRFYNCPAGWTCELEN 179
           +VP+YV++   +   LE    N K +                  GRF NCP GW C   N
Sbjct: 114 WVPQYVVDAHPEAATLEGILANPKLVG-----------------GRFDNCPDGWGCRTVN 156

Query: 180 SEMLKSYGLESKYTN-FRPGTGPALDAAILSSYKRGEPILTYYWSPTPLMGQVDLVRLE- 237
             M +   +E K    F  G+G  L  AI ++Y   +P   +YW+PT ++G+  +V ++ 
Sbjct: 157 DNMNQVIDMEGKGIEVFDHGSGETLATAIAAAYADEKPWFGFYWAPTAVLGKFPMVLVDL 216

Query: 238 ----------------EKAGVN--KTIDIKVGVSKVFHDEAPELVAILEKVNLPIDLLNQ 279
                              GV+   +  +K   +  F    PE+  ++  ++   D +N 
Sbjct: 217 GKYDADTHTCNSSKECASPGVSPYPSAAVKTAATADFQQREPEIAELMSNISFTNDQMNG 276

Query: 280 NLGRMAKERIESPKLAKIFLKEHPEVWHKWVSEDAAKKVDASL 322
            L  M      + + A  FL  + + W  W++++A +K+ A L
Sbjct: 277 VLAWMEDNNASAEEGAVYFLTNNKDQWGGWLNDEAHEKLSAIL 319