Pairwise Alignments

Query, 1229 a.a., YD repeat protein from Pseudomonas syringae pv. syringae B728a

Subject, 1317 a.a., Toxin protein Tse5 from Pseudomonas aeruginosa PA14

 Score =  292 bits (747), Expect = 1e-82
 Identities = 307/1125 (27%), Positives = 448/1125 (39%), Gaps = 183/1125 (16%)

Query: 229  LHGNPVDTTTGRKLLIDESDFSLPGLMPIEWTRFYASDLDVDSALGKGWVLPWEQS-LRR 287
            L G PV+   G KLL +E DF+L       + R Y S       LG+GW LP E   L  
Sbjct: 44   LVGKPVNPMLGSKLLPEEVDFALAAPDTFTFARGYLSSNPRIGRLGRGWWLPGESMHLEL 103

Query: 288  KGSFLYLSDNQGRSVPFVTLDYNQRIYNAQEQLYLVR--TEGGHYL------------LQ 333
                  L D QGR + F  L    + Y+  E+L+L R  + GG               LQ
Sbjct: 104  SEDACVLVDAQGRRIGFPALAPGAQHYSGSEELWLRRGGSSGGEAQAWRGRWAAVPAELQ 163

Query: 334  TLD--------NVFYYFGEVPDDNHPVPLQRVENALGHFLHFVRSEDGVLTDICATGGHR 385
            T +        + + +F   PD      LQ      G+   F  S  G+LT +  + G  
Sbjct: 164  TQEGSVLVLSGHSYLHFQRCPDGIWR--LQASFGRAGYRTEFRWSGRGLLTGVRDSAGRS 221

Query: 386  VHLHYDEV--NSRLSTVKRIVG-----------------DQAVETLVRYGYDNNGQLNSV 426
              L Y +    S      R+ G                    ++ LVRY + ++G L +V
Sbjct: 222  YALVYQQACEPSEGDDGLRLFGVILASHDGPPPDYIDPQSPGLDWLVRYQFSDSGDLIAV 281

Query: 427  YNRNGDSVRNFSYTDGLMTRHANALGLSCEYRWEVLDGKPRVVEHWTSDGEHFHFDYDFE 486
             +R G  VR F++ + ++  H    GL   Y W+V     RVV+   + G    F Y  +
Sbjct: 282  RDRLGQVVRVFAWREHMLVAHGEPGGLEVRYEWDVHAPHGRVVKQIEAGGLTRTFRYLRD 341

Query: 487  ARQTRITDVLGRRAEVTYNKDRRVIASTDFGGEQYRIALDNTGNITGLTLPDGNQLGFEY 546
            A  T ++D LGR            +   +F GE            T L   DG++  F+Y
Sbjct: 342  A--TEVSDSLGR------------VERYEFAGE------GGQRRWTALVRADGSRSEFDY 381

Query: 547  DDLSRLTAETDPLGRTTRYQHHYKTTLVKQITYPDGAVWTARYDSKGNLVAEI-DALGQK 605
            D   RL A  DPLGR TR +   +  ++++ + P  A +  R D +  L+ E+ DA+ ++
Sbjct: 382  DLFGRLVAMRDPLGRETRRRRDGQGRMLEEES-PGKARYRKRVDEETGLLVELEDAMQRR 440

Query: 606  TEYLNSEDG-----------------------LPHTIIDATYKSKYLWWNNLAQVERFQD 642
              +   E G                        P  I+D     + L WN    +    D
Sbjct: 441  WTFERDERGNATTVRGPAGSTRYAYEDPRLPDRPTRIVDPRGGERRLEWNRFGLLAALTD 500

Query: 643  CSGKSTWYRYDERDQLVAVTDALNNTTTLERKPGGEVLSINHPDGTRESFTYNAHGQVLT 702
            CSG+   Y YD   +LVA +D L   T     P G+++ +   DG+  S+ Y+A G+ + 
Sbjct: 501  CSGQVWRYDYDNEGRLVASSDPLGQLTRRRYDPLGQLIGLELADGSALSYEYDALGRQIR 560

Query: 703  HTNGKDQTTHLARNARGLPIRRQDPKGLIVGYQYDKALRLAALINENDATYTFAYDDSDR 762
              + K   T  +     L  R  D  G  + Y +D+A RL AL NEN     F YD  DR
Sbjct: 561  IADAKGHATLFSWGHGDLLARVSDAGGGELSYLHDEAGRLVALTNENGVQAQFRYDLLDR 620

Query: 763  LIEEKRIDQLTRRFSYNLGGHLTQVEEIGYSEKGERPQRSTHFERDPIGRLLARLNDDAR 822
            L+EE   D   +R+ YN    L   E        +   R T +  D  GRL +       
Sbjct: 621  LVEETGFDGRRQRYRYNAADELIARE--------DADGRETTYAYDRDGRLASIRVPATE 672

Query: 823  QDFTYDDSDRLLSIQRTPTDGGRKLGVTAEKLEFAYDILGRLTQESSPKG-----TLAYE 877
                  +  R L+  R  + GG        ++ + YD +G L  ES         ++ + 
Sbjct: 673  HAPALVERYRWLADGRLASAGGADC-----EVRYTYDEVGNLRLESQVHADGWVYSVEHS 727

Query: 878  YDPLSNLTTLTLPTGQHLNHLYYGSGHLHQLNLDGQLISDMERDDLHREIYRTQGKLTSC 937
            +D L    T        +  L YG GHLH   L G +    ERD LHRE+ R   +    
Sbjct: 728  HDALGVRQTSRYGDAPPVAWLTYGPGHLHGA-LVGAVELAFERDALHREVRRDARRDGQ- 785

Query: 938  FGYDALGRKTWQYATTLPAEKLSQIQNPLIKPERYVEHAYNPLHRRYEYDPAGELSRTLD 997
               DAL  +  Q+A       L ++Q   ++     +       R Y YD  G+L    D
Sbjct: 786  --DDALFTQERQHA------PLGRLQRSRLRLAGGFD-----WQRGYRYDGLGQLVGIDD 832

Query: 998  KLRGEVTYEYEANGRLLEHNPEKRFDGEEFRYDAAGNRL------------------NFN 1039
                 V YEY+  GRLL  +         +RYDAAGNRL                     
Sbjct: 833  NQYPSVRYEYDLGGRLLA-SRRAGAAASTYRYDAAGNRLEGVGEYAREDARQAFAENELY 891

Query: 1040 TSRFDRVK--------------DNRLKKWSNHEYKYDAWGNLVEKIVGIVRWQTFTYDSE 1085
             S F R +               NR+++ + + Y++DA GNLVE+I          YD  
Sbjct: 892  RSGFSRSETRASQAGEGPARWAGNRVERIAGNRYRFDALGNLVERIGADGERLRLAYDGA 951

Query: 1086 NRLVKTETMANSQVESTSSYQYDSLGRRVAKQSDIKGKTDHRLFLWQGLRLLREESPGQS 1145
             RLV             + Y+YD+L RR+AK     G      F W G R   E    + 
Sbjct: 952  QRLVHLTRDYADGTRLEARYRYDALSRRIAKVVLRDGVEQQVRFGWDGDRQCAEAFAREL 1011

Query: 1146 SLYLYEPGSYAPLARVDE-----------------KEGE----------AENKVYYFHTD 1178
               ++EPG + PL R+++                  EG+           E ++ +FHTD
Sbjct: 1012 RTTVHEPGGFVPLLRLEQACEPDPPELLQLRQAFAAEGQPLPAQCVPALGEARIAFFHTD 1071

Query: 1179 QIGTPLEMTDAEGQIVWQAKYRPWGAVEKLVVNDVEQNLRFQGQY 1223
             +GTPL+++D  GQ+ WQ     W AV         Q +RFQGQY
Sbjct: 1072 HLGTPLQLSDERGQLRWQGVPDDWRAVAP-ERQPGAQPIRFQGQY 1115



 Score = 27.3 bits (59), Expect = 0.009
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 119 INGQPAARKGDKLTCGAKIGTGSPNVFIGGGTQRYLPVDDEVSA 162
           ++G P +  G+K++ G  I TGSP V +G      + + D VSA
Sbjct: 1   MSGLPVSHVGEKVS-GGVISTGSPTVHVGSSA---VGLADRVSA 40