Pairwise Alignments

Query, 197 a.a., transcriptional regulator, TetR family from Pseudomonas syringae pv. syringae B728a

Subject, 178 a.a., DNA-binding transcriptional regulator RcdA from Escherichia coli Nissle 1917

 Score = 40.4 bits (93), Expect = 2e-08
 Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 10/176 (5%)

Query: 8   PIRRQQLIQATLTAVDQVGMGDASIALIARLAGVSNGIISHYFQDKNGLIAATMRHLMNA 67
           P RR+++IQATL AV   G+   +   IA LAGV  G +++YF   + L+          
Sbjct: 7   PQRREKIIQATLEAVKLYGIHAVTHRKIAALAGVPLGSMTYYFSGIDELLLEAFSRFTEI 66

Query: 68  LIQNVRERRQALTEDSPRAHLQVIIEGNFDASQVSGPAMKTWLAFWATSMHHPSLHRLQR 127
           + +  +     ++ D+P A  Q I +  + +   +   M+     +A +   P L  + +
Sbjct: 67  MSRQYQAFFSDVS-DAPGA-CQAITDMIYSSQVATPDNMELMYQLYALASRKPLLKTVMQ 124

Query: 128 INDHRLYSNLCCQFRRTLPLEQARSAARGLAALIDGLWLRGALSGDAFDTEQAQRI 183
                   N   + ++TL        AR L A I+G+ L           E+  R+
Sbjct: 125 --------NWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRM 172