Pairwise Alignments

Query, 333 a.a., extracellular solute-binding protein, family 1 from Pseudomonas syringae pv. syringae B728a

Subject, 367 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  137 bits (345), Expect = 4e-37
 Identities = 100/352 (28%), Positives = 157/352 (44%), Gaps = 29/352 (8%)

Query: 4   LSKTLAALLLCGAASLAQAAETAIC----------YNCPPEWADWGTQLKAIADSTGVQV 53
           LS + A LL   AA++A+ +E  I              P  W  +G  +       G++V
Sbjct: 9   LSLSTAMLLATTAAAVAEPSEELIAAAKKEGTLTTIALPHNWCGYGDVIAGFKAKYGIEV 68

Query: 54  PLDNKNSG-----QALAQIVAEQAAPVADVVYYGVTFGLQAQKAGVVDTYKPKHWDEIPA 108
              N ++G     +A+            DV+  G++FG  A+  G++  YK   WD IP 
Sbjct: 69  NELNPDAGSGDEIEAIKANKGNTGPQAPDVIDVGLSFGPSAKAEGLIQPYKVSTWDTIPD 128

Query: 109 GLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPEYKGMVGYL-DPSSAFVGY 167
             KDPEG+W+  + G L  +VN D +    VP+ WADL K +Y   V    DP ++    
Sbjct: 129 TAKDPEGYWYGDYYGVLSFVVNTDIV--KDVPKDWADLKKSDYANSVALAGDPRASNQAV 186

Query: 168 VSAVAINQAMGGT-LDNFGPA-IDYFQKLAKNSPIVPKQTAYARVLSGELPILVDYDFN- 224
            +  A   A G T     G A + +F ++ K    VP     A +  G  PI++ +D+N 
Sbjct: 187 QAVYAAGLAAGETDAAKAGEAGLAFFAEVNKAGNFVPVIGKSASLAQGSTPIIIAWDYNG 246

Query: 225 -AYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKVLDFVLSDEGQALWAKA 283
            ++R        V  V+P  G +   YV ++ A APH   A+  ++++ SDEGQ  W K 
Sbjct: 247 LSWRDSLNGNPPVEVVVPASGVVAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKG 306

Query: 284 YLRPVR-------SKMPAEVAAQFLPDSDYARAGVVDYQHMAAVQEAFAARY 328
           Y  P+R        K+P E+  +  P   Y +A        A  +EA   ++
Sbjct: 307 YCHPIRFNDLVKNGKVPKEMLDKLPPAESYEKAVFPTLDEQAKGKEAITTKW 358