Pairwise Alignments

Query, 337 a.a., tRNA-U20-dihydrouridine synthase from Pseudomonas syringae pv. syringae B728a

Subject, 336 a.a., tRNA dihydrouridine synthase DusB from Lysobacter sp. OAE881

 Score =  396 bits (1018), Expect = e-115
 Identities = 203/322 (63%), Positives = 240/322 (74%), Gaps = 2/322 (0%)

Query: 1   MSAV--RIGPYTVQNGLILAPMAGVTDQPFRQLCRRLGAGLVVSEMVTSDMSLWNSRKSR 58
           MSA+  RIGP+ +   ++LAPMAGVTD+PFR LC+R+GAGL VSEM TSD   W++ KSR
Sbjct: 1   MSALSFRIGPHEIAPRVVLAPMAGVTDKPFRILCKRMGAGLCVSEMTTSDPRFWSTSKSR 60

Query: 59  LRMIHEGDPEPRSVQIAGGDPQMLADAARANVELGAQIIDINMGCPAKKVCNKAAGSALL 118
            RM H+G+P P SVQIAG  P+++ADAAR NV+ GAQIIDINMGCPAKKVCN  AGSAL+
Sbjct: 61  HRMDHDGEPSPISVQIAGTVPEVMADAARYNVDHGAQIIDINMGCPAKKVCNAWAGSALM 120

Query: 119 KDEQLVNDILQAVVAAVDVPVTLKIRTGWDRDNRNGLTVAKIAEQAGITALAVHGRTRAD 178
           ++ +LV  IL AVV AV+VPVTLKIRTGW    RN L +A+IA+ AGI ALAVHGRTR  
Sbjct: 121 REPELVARILDAVVRAVNVPVTLKIRTGWAEGQRNALQIARIAQDAGIAALAVHGRTRDQ 180

Query: 179 LYTGEAEYDTIALIKQAVSIPVFANGDIDSPEKARHVLKATGADGLLIGRAAQGRPWIFR 238
            YTG AEYDTIA +K A+SIPVFANGDIDSP+KA  VL  TG D +L+GRAAQGRPWIFR
Sbjct: 181 QYTGVAEYDTIAEVKAALSIPVFANGDIDSPQKAAQVLAHTGCDAVLVGRAAQGRPWIFR 240

Query: 239 EIEHFLRTGETLPAPQSSEVERILLEHLAALHVFYGDVMGVRIARKHVSWYLATLPGARE 298
           EI H+L  G+ L  P  +EV  +LL HL  LH FYG+  GVRIARKH+ WY    P    
Sbjct: 241 EIAHYLEHGDVLAEPTLAEVRDVLLGHLEHLHAFYGETSGVRIARKHLGWYAKDRPENAA 300

Query: 299 FRAHFNRLEDTEAQCANVREFF 320
           FRA  NR E  EAQ    R++F
Sbjct: 301 FRAVVNRAETAEAQLTLTRDYF 322