Pairwise Alignments

Query, 294 a.a., type II secretion system protein from Pseudomonas syringae pv. syringae B728a

Subject, 321 a.a., Type II/IV secretion system protein TadC, associated with Flp pilus assembly from Pseudomonas fluorescens FW300-N2E2

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 8/292 (2%)

Query: 9   MLAAAAFLLLSGIARQRSNERL--VARRLRGQVIRESRIGSLLRLLGDTRIGQRSISLD- 65
           +LAA A LLL    +     RL  + R   G    +   G+L  LL   RIGQR  S D 
Sbjct: 31  VLAAVALLLLMLGLQDPVQRRLALIKRGYAGSTTGQEAPGNLQLLL--ERIGQRFASTDQ 88

Query: 66  ---SETQILLNRIGWRRASKRSLFAACQVGVPVGLMVIVILGQLLFFKGIQQPLIAPIFA 122
              S TQ LL   G+R AS   ++ A ++ +P+ L+ I +L   +    +   L+A    
Sbjct: 89  AHTSATQTLLTHAGYRSASAVQMYWAVRLMLPLLLVGIALLLLPMVKVSVAIGLLAVTLI 148

Query: 123 LGAGYLLPKRILAAVARRRQKQVVVEISTFIPLLRILFESGMAVEQALRVLSNEGKDLLP 182
            G G+LLP   +    + RQ ++       + L+ +  ESG+A+   +  ++ E      
Sbjct: 149 AGIGWLLPAIYVGKRKQARQGRLRAAFPDALDLMVVCVESGLALPTTIERVAEEMSVSQV 208

Query: 183 VLSEEIRVVLMRVDSGLELGEELRKTAALLDVDELSDTCVILNQLIHQGGGALKSLLTLK 242
            L+EE+ +V  ++ +G+   E L++ A    ++++     +L Q I  G     +L    
Sbjct: 209 ELAEELALVNAQIRAGITSTEALKQLAVRTGLEDIQGLVSLLAQSIRFGTSVADTLRIYA 268

Query: 243 QLIDDRRLTRLQEYISKLSAKMSVVMMVFLFPALLIVLAGPGFMAISRALGS 294
               DRR    +E  +K+  K+   ++  L+P+  +V  GP  + + RA G+
Sbjct: 269 DEFRDRRTQAAEEMGAKIGTKLIFPLIFCLWPSFFLVAIGPAMIGVFRAFGN 320