Pairwise Alignments

Query, 455 a.a., DNA replication and repair protein RadA from Pseudomonas syringae pv. syringae B728a

Subject, 454 a.a., DNA repair protein RadA from Phaeobacter inhibens DSM 17395

 Score =  421 bits (1083), Expect = e-122
 Identities = 226/442 (51%), Positives = 297/442 (67%), Gaps = 11/442 (2%)

Query: 4   AKRLYGCTECGATFPKWAGQCSECGAWNTLVET--MIESGAAAPPTGRTGWTGSQAQIRT 61
           AK  Y C+ CGA+F KW+G+C  CG WN++ E   + + G A+   G       + +   
Sbjct: 2   AKTTYSCSACGASFSKWSGRCDGCGEWNSITEDKGLSKGGPASKSLGMR-----RGKTIP 56

Query: 62  LAEVSVEEIP--RFSTNSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAQR- 118
           L++++ EE P  R      ELDRVLGGGLV  S +L+GGDPGIGKST+LLQ     AQ  
Sbjct: 57  LSDLATEEAPPPRTCCGVGELDRVLGGGLVPASAILVGGDPGIGKSTLLLQAAAQFAQSG 116

Query: 119 MPALYVTGEESQQQVAMRARRLGLPQDKLRVMTETCIETIIATAKVEKPKVMVIDSIQTI 178
           +  +YV+GEE+  QV MRA+RLGL +  +++  ET +  I+ T + E+P++ +IDSIQT+
Sbjct: 117 LKTIYVSGEEASAQVRMRAQRLGLAEAPVKLAAETNLRDILTTLEAERPQLAIIDSIQTM 176

Query: 179 FTEQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLY 238
           + + + SAPG VSQVR +A  L  +AK +G +I +VGHVTKEG +AGPRV+EHMVDTVLY
Sbjct: 177 WADHVDSAPGSVSQVRAAAHELTTFAKTNGVSIIMVGHVTKEGQIAGPRVVEHMVDTVLY 236

Query: 239 FEGESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMA 298
           FEGE   + R+LRAVKNRFG  +E+GVF MT  GL EV NPSA+FL+      PGSVV +
Sbjct: 237 FEGERGHQFRILRAVKNRFGPADEIGVFEMTGGGLSEVRNPSALFLSERGTPSPGSVVFS 296

Query: 299 TWEGTRPMLVEVQALVDDSHMSNPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNV 358
             EGTRP+LVE+QALV  S  S PRR  +G D +RLAM+LAVL    GIP    DV+LNV
Sbjct: 297 GIEGTRPVLVEMQALVAPSPHSQPRRAVVGWDSSRLAMILAVLEARCGIPFAGLDVYLNV 356

Query: 359 VGGVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKH 418
            GG+K+ E A+DLA+ AA++S+  +  LP D +VFGE+ LSG +RP P  + RLKEA K 
Sbjct: 357 AGGMKISEPAADLAVAAALLSAREDTALPADTVVFGEISLSGALRPAPQTENRLKEAQKL 416

Query: 419 GFKRAIVPKGNAPKEAPPGLQI 440
           GF  AI P G     A PGL +
Sbjct: 417 GFTAAIAPSG-GKSVAVPGLAV 437