Pairwise Alignments

Query, 165 a.a., transcription elongation factor GreB from Pseudomonas syringae pv. syringae B728a

Subject, 185 a.a., transcription elongation factor GreB from Herbaspirillum seropedicae SmR1

 Score = 79.7 bits (195), Expect = 2e-20
 Identities = 52/177 (29%), Positives = 97/177 (54%), Gaps = 18/177 (10%)

Query: 1   MSRAFVNEDNAAAEAEQ-PVERLVSTQINYVTAEGLTLLKKHVGSLQAQH--------SM 51
           M++AFV E +   + E   +  + +   NY+T +G   +K  +  L  +         S 
Sbjct: 1   MNKAFVKESDGDDDDEDIALPSVPAGSKNYMTPQGHQRIKDELLHLIDEERPEVVRVVSW 60

Query: 52  QTALGEAAD-------KQRLADLERDLRYFNQRLQSAQVVAPAV--STEKVQIGSWVTFA 102
             + G+ ++       K+RL +++R +R+  +RL +A+VV P+V   ++++  G+ VT+ 
Sbjct: 61  AASNGDRSENGDYLYGKKRLREIDRRIRFLTKRLDNAEVVDPSVHHGSDQIFFGATVTYE 120

Query: 103 DEQDNRQRVHLVGEDQADAANGLINWGSPLGRALIGAQKGDEVLWQRPAGDQSIEVL 159
           +++     V +VG D+ D   G I+W SP+ RAL  A++GDEV+ Q PAG + + +L
Sbjct: 121 NQRGEAHTVTIVGIDELDPLKGRISWISPVARALTKAREGDEVVLQTPAGLEQLTIL 177