Pairwise Alignments

Query, 285 a.a., Uncharacterized P-loop ATPase protein UPF0042 from Pseudomonas syringae pv. syringae B728a

Subject, 301 a.a., RNase adapter RapZ from Rhodanobacter denitrificans MT42

 Score =  254 bits (648), Expect = 2e-72
 Identities = 131/285 (45%), Positives = 181/285 (63%), Gaps = 2/285 (0%)

Query: 1   MRMIIVSGRSGSGKSTALDVLEDNGFYCVDNLPAGLLPELAERALINTELAEPL-LAVSI 59
           + +I+++G SG GK+ AL  LED  FYCVDNLP+ LLP+L   A        P  +AV +
Sbjct: 17  IHLIVLTGMSGGGKTVALRALEDLEFYCVDNLPSVLLPQLVNAATSGDRRGRPRRIAVGV 76

Query: 60  DARNLPSHLTRFPQMLSEVRLRNIQCDVLYLDADEATLLKRFSETRRRHPLSTADRSLAE 119
           D RN  +     P +LSE+    +Q  +++LD  +  L+KR+SETRRRHPL+T   SLA+
Sbjct: 77  DVRNRGTDFAHMPTVLSELAGAGVQVHLIFLDCRDDVLIKRYSETRRRHPLATRGVSLAD 136

Query: 120 AIRDETALLGPIIDLADLKINTTHLNLYQLRDALKLRLLNKPEPGTAFLIESFGFKRGMP 179
           AI +E  LL P+I +A+  I+++ LN++QLR  +        E G   + +SF F+RG+P
Sbjct: 137 AIVEERRLLRPLIAIAEKVIDSSELNVHQLRRLVATGYAQATE-GLTLMFQSFAFRRGLP 195

Query: 180 VDADLVFDVRCLPNPYWKPELRDHSGLEQPVIDYLSVQPDVEEMFQDIFAYLNKWLPRFA 239
           +DAD VFD RCLPNP+W+P LR  SG + PV ++L   P V E F D   +L+ WLPRF 
Sbjct: 196 LDADFVFDARCLPNPHWEPRLRPLSGKDAPVREFLDAAPLVGEYFADTARWLDAWLPRFE 255

Query: 240 ASNRSYVTIAIGCTGGHHRSVYLTERLGQVLQQSLKNVQVRHRDL 284
             +RSYVTI+IGCTGG HRSVYL E+L    +   + V   HR+L
Sbjct: 256 QDDRSYVTISIGCTGGRHRSVYLVEKLAAHYRSHREGVLTFHREL 300