Pairwise Alignments

Query, 319 a.a., D-alanine--D-alanine ligase from Pseudomonas syringae pv. syringae B728a

Subject, 365 a.a., D-alanine--D-alanine ligase A from Klebsiella michiganensis M5al

 Score =  156 bits (394), Expect = 8e-43
 Identities = 111/345 (32%), Positives = 172/345 (49%), Gaps = 55/345 (15%)

Query: 20  RVAVLFGGKSAERAVSLNSGNAVLGALLEA-------GVDAFG---IDVGDDFL------ 63
           RV ++FGGKSAE  VSL S   ++ A+ +        G+D  G   I+   ++L      
Sbjct: 5   RVGIVFGGKSAEHEVSLQSAKNIVEAIDKTRFDVVLLGIDKQGQWHINDASNYLLNPQDP 64

Query: 64  --------------------QRLVSEK-------IDRAFIVLHGRGGEDGTMQGLLECLE 96
                               Q+L++         ID  F ++HG  GEDG++QG+L    
Sbjct: 65  AHIALRPSDITLAQIPGREAQQLINADSGQPLAAIDVIFPIVHGTLGEDGSLQGMLRMAN 124

Query: 97  IPYTGSGVLASALAMDKLRTKQVWQSLGLATPAHAVL----ENESDCICAATELGLPLIV 152
           +P+ GS VL SA  MDK  TK++ +  GL+      L     N+        +LGLPL V
Sbjct: 125 LPFVGSDVLGSAACMDKDVTKRLLRDAGLSIAPFITLTRANRNQMSFAEVQAKLGLPLFV 184

Query: 153 KPAHEGSSIGMAKVNSVDELIAAWKAASTYDSQVLVEQWIQGPEFTVASL-----RGQVL 207
           KPA++GSS+G++KVNS ++   A   A  +D +V+VEQ I+G E   A L     +    
Sbjct: 185 KPANQGSSVGVSKVNSEEQYQQAVALAFEFDHKVVVEQGIKGREIECAVLGNDNPQASTC 244

Query: 208 PPIGLGTPHSFYDYDAKYLASD-TQYRIPCGLGDAQEQELKQLAARACDAIGIAGWARTD 266
             I L +   FY YD KY+     +  +P  +      +++Q+A RA   +G +G AR D
Sbjct: 245 GEIVLNS--EFYAYDTKYIDDQGAKVVVPAAIDSDVNDKIRQIAVRAYQTLGCSGMARVD 302

Query: 267 VMQDAQGKFWLLEVNTVPGMTDHSLVPMAARAAGLDFQQLVLAIL 311
           V   A+    + E+NT+PG T+ S+ P   +A+GLD+  L+  ++
Sbjct: 303 VFLTAENDVVINEINTLPGFTNISMYPKLWQASGLDYTSLISRLI 347