Pairwise Alignments

Query, 162 a.a., Protein of unknown function DUF796 from Pseudomonas syringae pv. syringae B728a

Subject, 162 a.a., type VI secretion system tube protein Hcp from Pseudomonas fluorescens SBW25-INTG

 Score =  103 bits (258), Expect = 1e-27
 Identities = 58/163 (35%), Positives = 96/163 (58%), Gaps = 6/163 (3%)

Query: 1   MAFDAYIKIEGIPGEALDDRYKDCIEITGYGFGMHQSTSATASSSGGASSGRTSLSDFTF 60
           MA D +IKI  I GE++D  +KD I++  + +GM QS +      GGA  G+ ++ D + 
Sbjct: 1   MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMAQSGNMHVGGGGGA--GKVNIQDLSL 58

Query: 61  TKSLDKSSCKLMESLCAGKHLKEVVLSLHRAGGD-KVKYFEVLLEEVIISNYTQHANDGI 119
           TK +DK+S  LM    +GKH+ +V L++ +AGG+ +V+Y  + LEEV++++ +   + G 
Sbjct: 59  TKYVDKASPNLMMHCASGKHIDKVKLTVRKAGGESQVEYMVINLEEVLVTSLSTGGSGGD 118

Query: 120 P--SETISLNYGKIKTTYTQQKRSDGAGGGNVSGGWN-RINNK 159
              +E ++LN+ ++   Y  QK      GG +  GWN R N K
Sbjct: 119 DRLTENVTLNFAQVMVDYQPQKADGTKDGGAIKFGWNIRSNTK 161