Pairwise Alignments

Query, 476 a.a., Exodeoxyribonuclease I subunit C from Pseudomonas syringae pv. syringae B728a

Subject, 482 a.a., exonuclease I (RefSeq) from Shewanella loihica PV-4

 Score =  451 bits (1159), Expect = e-131
 Identities = 225/433 (51%), Positives = 295/433 (68%), Gaps = 5/433 (1%)

Query: 4   SIFWYDYETTGINPRNDRALQMAGIRTDTELNEIAPPVNLHCQLSDDILPHPAACMITGI 63
           SIFW+DYET G NP  DR  Q AGIRTD +LN I+ PV  +C+ + D LP P A +ITGI
Sbjct: 20  SIFWHDYETFGANPAKDRPSQFAGIRTDMDLNIISEPVTFYCKQASDYLPSPEAILITGI 79

Query: 64  TPATLAEKGLCEADFMTRVHAELSAPGTCGAGYNTLRFDDEVTRYSFYRNFFDPYAREWQ 123
           TP     KG+ EA+FM R+++E S P TC AGYN+LRFDDEVTRY FYRNFFDPYAREWQ
Sbjct: 80  TPQLANLKGMPEAEFMARINSEFSQPNTCVAGYNSLRFDDEVTRYGFYRNFFDPYAREWQ 139

Query: 124 GGNSRWDLIDVVRAAYALRPDGIVWPE-QDGRVTLKLERLTAANGIDHGQAHDALSDVRA 182
            GNSRWD+ID+VRA YALRP+GI WPE +DG  + KLE LT AN + H +AHDA+SDV A
Sbjct: 140 NGNSRWDIIDLVRACYALRPEGINWPEKEDGSPSFKLEHLTQANNLSHDKAHDAMSDVYA 199

Query: 183 TIALARLIREKQPKLYDYLFALRSKQKVQEQVRL--MQPLVHISGRFSAARNYLGVVLPL 240
           TIA+A+LI+E+QPKL+DY F LR K +V +Q+ +  MQPL+H+S + SA      ++ P+
Sbjct: 200 TIAMAKLIKERQPKLFDYYFNLRKKNEVSKQIDVLNMQPLIHVSSKISALHGCTTLIAPV 259

Query: 241 AWHPHNRNALIVCDLHLDHAPLLHEDAEILKRRLYTRHDALSDGELPVPLKLLHINRCPV 300
           A H  N+NA+I  +L +D  PL+   A+ ++ R+YT    L+  ELP+ LK LHIN+CP 
Sbjct: 260 AHHSTNKNAIICVNLAMDVTPLIELSADEIRERMYTPRVDLASDELPIGLKQLHINKCPF 319

Query: 301 IAPLGVLRSEDQQRLQLDMAGYQARATQLSENREVWHGKLAAIYGKDDFAASEDPEQQLY 360
           IA    L   + QRL++D    +A+  +L ++ E+   KL A++  +      DP+ QLY
Sbjct: 320 IATAKTLTDGNAQRLEIDKEFARAQYKRLRQHPEI-REKLVAVFDTEHGNEISDPDLQLY 378

Query: 361 D-GFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRYRARNFPDTLSGEEQTRW 419
             GF    D+   E +R   P+ LA     FDD RLPE+LFRYRARN+P+TL   EQ RW
Sbjct: 379 SGGFFSHADKSKMEIIRHTAPQHLAALELDFDDERLPEMLFRYRARNYPETLDDTEQQRW 438

Query: 420 RDFCQQRLRNPEW 432
           R FCQ RL +P++
Sbjct: 439 RTFCQSRLNDPDY 451