Pairwise Alignments

Query, 486 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

Subject, 474 a.a., RND efflux system, outer membrane lipoprotein CmeC from Pseudomonas fluorescens FW300-N2E2

 Score =  689 bits (1778), Expect = 0.0
 Identities = 343/469 (73%), Positives = 406/469 (86%)

Query: 1   MSKSLISLAVTAFILGGCSLIPDYKQPQAPVAAQYPQGPAYSPVEGAKMAAAEQGWRHFF 60
           M++SLI LA+TA +L GCSLIP+Y++PQAPVAA YPQGPAY     A  AA EQGWR FF
Sbjct: 1   MTRSLIGLAITAAVLSGCSLIPEYQRPQAPVAAHYPQGPAYQAANAADQAAVEQGWREFF 60

Query: 61  NDPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPGDQS 120
           +DPALQ+LIQTAL+NNRDL+VAALN++AYRAQYRIQR+DLFPA+ A  SG+RQR+P  QS
Sbjct: 61  HDPALQRLIQTALINNRDLKVAALNVEAYRAQYRIQRADLFPAIGANASGTRQRLPSAQS 120

Query: 121 QTGQPGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFASEEARRSTQISLVASVANA 180
           Q GQP I+S Y   LG+SSYELDLFGR+ SLS+QALETY ++ +ARRS QIS+V+SVANA
Sbjct: 121 QPGQPSISSQYDVNLGISSYELDLFGRIASLSQQALETYLSTAQARRSAQISIVSSVANA 180

Query: 181 YMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQYQ 240
           Y+TWQAD+ELLKLT++TL TYEES RLT+R+++VGV SALDL+Q+RT+V+ ARA LA YQ
Sbjct: 181 YLTWQADRELLKLTENTLGTYEESLRLTTRSNQVGVVSALDLAQARTSVQGARASLANYQ 240

Query: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLDSDMLTEMPAGLPSDLLQRRPDILEAEHSLKA 300
           R VA+D+N+LVLLLGT LP +LP    LD D+L  +PAGLPSDLL RRPDIL AEHSL A
Sbjct: 241 RRVAEDENALVLLLGTGLPADLPEPQSLDGDLLANVPAGLPSDLLVRRPDILAAEHSLLA 300

Query: 301 ANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPIFNAGNLRASL 360
           ANANIGAARAAFFPSISLTA+AGTSS+ L GLFK  SG+W F P+I++PIFNAG LRASL
Sbjct: 301 ANANIGAARAAFFPSISLTANAGTSSANLDGLFKSSSGSWAFSPTISLPIFNAGALRASL 360

Query: 361 DYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQDYYRLAERRY 420
           DYSKIQK+I VANYEKAIQTAFQEVSDGL +RKTY +QLQAQ+D V A+QDYY+LAERRY
Sbjct: 361 DYSKIQKDIGVANYEKAIQTAFQEVSDGLTARKTYVDQLQAQKDLVNASQDYYQLAERRY 420

Query: 421 RIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGWYER 469
           RIG+DS+LTFLDAQRSLFS+QQ LI DRL+QL +EV+LY+ALGGGW ER
Sbjct: 421 RIGVDSHLTFLDAQRSLFSSQQGLINDRLAQLQAEVSLYRALGGGWNER 469