Pairwise Alignments

Query, 486 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

Subject, 474 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  614 bits (1584), Expect = e-180
 Identities = 317/474 (66%), Positives = 386/474 (81%), Gaps = 4/474 (0%)

Query: 1   MSKSLISLAVTAFILGGCSLIPDYKQPQAPVAAQYPQGPAYSPVEGAKMAAAEQGWRHFF 60
           M+KSL++LA+ A  LGGCSLIP+Y++P APVA  +PQG AY P   A+ +    GWR FF
Sbjct: 1   MNKSLLALALAA-ALGGCSLIPEYQRPDAPVAGDWPQGEAY-PQGAAQASERALGWREFF 58

Query: 61  NDPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPGDQS 120
            DPALQQLI+ AL NNRDLRVAALN+DAYRA YR+QR+D+ PAVSA GSG+R R PGD +
Sbjct: 59  RDPALQQLIEVALENNRDLRVAALNVDAYRALYRVQRADVLPAVSADGSGTRSRTPGDMN 118

Query: 121 QTGQPGITSSYSATLGVSSYELDLFGRVRSLSEQALETYFASEEARRSTQISLVASVANA 180
            TG+P I+S YSAT GVS +ELDLFGR+RSL +QALE YFASE A+RSTQISL+ASVANA
Sbjct: 119 MTGEPAISSQYSATFGVS-WELDLFGRLRSLRDQALEEYFASEAAQRSTQISLIASVANA 177

Query: 181 YMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQYQ 240
           ++T QAD+ LL++T+DTLKTYEES  LT R+ +VGV+SAL+L Q+R+AV+SAR  + QY 
Sbjct: 178 WLTLQADQALLQVTRDTLKTYEESLGLTQRSFDVGVASALELRQARSAVDSARVSIEQYT 237

Query: 241 RLVAQDQNSLVLLLGTSLPDNLPASHLLDSDMLTEMPAGLPSDLLQRRPDILEAEHSLKA 300
           RLVAQD+N+L LLLG SLP  LP+   L+   L  +P GLPSDLLQ+RPDIL+AE+ L+A
Sbjct: 238 RLVAQDRNALTLLLGQSLPAGLPSGDGLERTQLAALPIGLPSDLLQQRPDILQAEYQLRA 297

Query: 301 ANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPIFNAGNLRASL 360
            NA+IGAARAAFFP ISLT +AGT+SSELSGLF GGSG W F PSI++PIFNAG LRA+L
Sbjct: 298 VNASIGAARAAFFPRISLTGAAGTASSELSGLFDGGSGYWSFSPSISVPIFNAGQLRANL 357

Query: 361 DYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQDYYRLAERRY 420
           DY++I K I VA YEKAIQTAF+EV+DGLA++ TY  Q+QAQRD +  ++DYY LAERRY
Sbjct: 358 DYAQISKNIQVAQYEKAIQTAFREVADGLAAQATYTRQVQAQRDLLQTSEDYYNLAERRY 417

Query: 421 RIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGWYERTGQTE 474
           R G+DS LT LDAQR LF+ QQ LI DRL+Q+TSEVNL+KALGGGW E  GQT+
Sbjct: 418 RTGVDSYLTVLDAQRQLFNVQQQLIGDRLAQMTSEVNLFKALGGGWQE-AGQTQ 470