Pairwise Alignments

Query, 386 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

Subject, 379 a.a., MexX family efflux pump subunit from Klebsiella michiganensis M5al

 Score =  366 bits (939), Expect = e-106
 Identities = 193/372 (51%), Positives = 258/372 (69%), Gaps = 19/372 (5%)

Query: 7   VTVLVTAIALATLLSGCSKKEQAAPPAQTPQVGVVTIKAQPYTLTTELPGRTTAFRVAEV 66
           VT+L + I  A LLSGC       P AQ PQV V  + + P ++TTELPGRT+A+RVAEV
Sbjct: 7   VTLLSSLIISAILLSGCDNSGDGQPHAQIPQVSVYVVHSAPLSVTTELPGRTSAYRVAEV 66

Query: 67  RPQVNGIILKRLFTEGGDVKAGQQLYQIDPAVYEANANSAKATLQSAKSMS-------DR 119
           RPQVNGIIL+R F EG DV AGQ LYQIDPA Y+A  NS K     A++ +        R
Sbjct: 67  RPQVNGIILQRNFVEGSDVSAGQSLYQIDPATYQAAYNSTKGDEAKAEAAAAIAHLTVKR 126

Query: 120 YKQLVSEQAVSRQEYDTALASTQEA-------QAALQTAQINLRYTKVLAPISGRIGRSA 172
           Y  L+  + +S+QEYD A+A+ ++A       +AA+++A+INL YTKV +PISGRIG+S+
Sbjct: 127 YAPLLGTKYISQQEYDQAVATARQADADVIAAKAAVESARINLAYTKVTSPISGRIGKSS 186

Query: 173 VTEGALVSSAQTDAMATIQQLDPIYVDVVQSSADMLKLRSDLDSGKLQKAGDNAAKVKLT 232
           VTEGALV++ Q DAMAT+QQLDPIYVDV +SS D ++L+ +     LQ  G++   V+L 
Sbjct: 187 VTEGALVTNGQADAMATVQQLDPIYVDVTESSNDFMRLKQE----SLQH-GNDTKNVQLI 241

Query: 233 LEDNSVYAQEGKLEFSEVSVDQTTGSVTLRAVFPNPEHRLLPGMFVHAQLQAGVNSKAIL 292
           +E+   Y  +G L+FS+V+VD++TGS+TLRA+FPNP+H LLPGMFV A++  GV+  AIL
Sbjct: 242 MENGQPYTLQGALQFSDVTVDESTGSITLRAIFPNPQHALLPGMFVRARIDEGVSPNAIL 301

Query: 293 APQQGVTRDLKGTPTAMVVNQDNKVEMRTLVANRTVGSDWLIEDGLKEGDRVITEGLQYV 352
            PQQGVTR  +G  + M+VN  N+VE R + A + +G  WL+  GLK G++VI  GLQ V
Sbjct: 302 VPQQGVTRTPRGEASVMLVNDKNQVETRAVTAAQAIGDKWLVTSGLKAGEKVIVSGLQKV 361

Query: 353 KPGAEVKVAEAT 364
           +PG  VK  E T
Sbjct: 362 RPGVTVKAEEDT 373