Pairwise Alignments

Query, 714 a.a., Helicase c2 from Pseudomonas syringae pv. syringae B728a

Subject, 681 a.a., ATP-dependent DNA helicase from Lysobacter sp. OAE881

 Score =  202 bits (513), Expect = 6e-56
 Identities = 195/681 (28%), Positives = 297/681 (43%), Gaps = 107/681 (15%)

Query: 61  EAGTGTGKTVAYAIASIPTAKAAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFTFAL 120
           EAGTGTGKT AY + ++     +GK+ +++T T ALQ+Q+ ++DLP +    G+    AL
Sbjct: 52  EAGTGTGKTFAYLVPAL----LSGKKTIVSTGTRALQDQLYHRDLPRVRDALGVGLKTAL 107

Query: 121 AKGRGRYMCLSKLDALLQESDATNATAQLFEEEGFKIEVDEASQKLFTSMLQKLAGNKWD 180
            KGR  Y+C  ++     E   T+               D A+Q       Q++    W 
Sbjct: 108 LKGRANYLCHYRMRQAQGEPRFTSR--------------DMAAQ------FQRIVA--WS 145

Query: 181 G--------DRDSWPQELADQDWARLTTDHSQCTNRHCPNFQQCAFYKAREGMGKVDVIV 232
           G        + D+ P++        +T+    C    CP F  C   +AR+     D++V
Sbjct: 146 GRTRMGDMAELDALPED--SPLLPMVTSTAENCLGSECPFFNDCFVVQARQRAQAADLVV 203

Query: 233 TNHDMVLADLAL---GGGAVLPDPRDTLYVFDEGHHLPDKAIGHFAHYTRLKSTADWLEQ 289
            NH ++LADLAL   G G +LP  +   +V DE H LP+ A   F      +     L +
Sbjct: 204 VNHHLLLADLALKQEGFGEILPGAQT--FVVDEAHQLPELAAQFFGEALSARP----LVE 257

Query: 290 TAKNLAKLLAQHPLPGDLGKLIEQVPELAREIKGHQQFMFGACEQL----ADFRAGED-- 343
            A++      Q P        +  V E AR ++   + +  A ++L       RA ED  
Sbjct: 258 LARDALTECKQVP------SALAAVQEPARALEQGVRAVRAAMDELPVRGTRRRAAEDAN 311

Query: 344 ----MQGRERPRHRFVGGVIPEHIREMGIELKKGFARLDDLFTRLTELLKEGMDGEVNIG 399
                   +     F   V+P      G +     A            LK   DGE    
Sbjct: 312 VEAAFDALDAALRAFHAAVVPYASASPGFDACAARA------VEFEGRLKRWRDGE---D 362

Query: 400 IASHQAEEWYPLFGSLLARAHGNWELWTAFTAEDPEDSPPMAR------WLTLADSGAMF 453
           +   + EE              N +      A D +  P          W  L   G   
Sbjct: 363 VPVDEDEE--------------NADSVETTEAADSDAKPSRKHADESVLWYELTARG--- 405

Query: 454 DIEVNASPILAAEMLRRNLWNIAYGALVTSATLTALGKFDRYRMRAGLP-KGAV---TAV 509
              ++ +P+  A  L ++        + TSATL   G+F+ + ++ GL  KG     T +
Sbjct: 406 -FRLSRTPLDVAGPLAQHRARSQAAWIFTSATLAVGGRFEHFAIKLGLYLKGEDPPHTLL 464

Query: 510 VPSPFHHADAGVLRVPDLKADPRDSVAH-TAAIIRDLPGLVEGSRG-TLVLYSSRKQMQD 567
           VPSPF      +  +P  +  P   V H   ++I  +  ++E S G   VL++S + +++
Sbjct: 465 VPSPFDWETQALCYLP--RGLPEPIVRHYNESMIDKVRPVLEASNGRAFVLFASHRALRE 522

Query: 568 VFDGLDRDWRKQVFIQGNLSKQETLNKHKARVDSGESSVLFGLASFAEGVDLPGAYCEHV 627
             + L +D    +F+QG   +   L + +A   SG + VL G ASF EGVD+ G     V
Sbjct: 523 AAELL-KDGPWPLFVQGEAPRAVLLERFRA---SG-NGVLLGAASFREGVDVAGDALSVV 577

Query: 628 VIAKIPFAVPDDPVEAALAEWIEARGGNPFMEIAVPDASLRLVQACGRLLRTEEDRGTIT 687
           VI K+PFA PDDPV  A  + I   GGNPF +  +P A + L Q  GRL+R E DRG + 
Sbjct: 578 VIDKLPFAAPDDPVFEARLDAIRRNGGNPFRDEQLPQAVIALKQGAGRLIRNENDRGVLV 637

Query: 688 LLDRRVVTQRYGKAILNALPP 708
           L D R+ ++ YG   LN+LPP
Sbjct: 638 LCDPRLTSKTYGSVFLNSLPP 658