Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase and ligase from Pseudomonas syringae pv. syringae B728a

Subject, 562 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas aeruginosa PA14

 Score =  695 bits (1793), Expect = 0.0
 Identities = 342/561 (60%), Positives = 427/561 (76%), Gaps = 9/561 (1%)

Query: 1   MIDNFWKDKYPSGIPADINPDEYPNVQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG 60
           M   FW DK P+G+P  ++   Y +V  V ++SC++FAD+PAFSNLG T++Y EL  LS 
Sbjct: 1   MQPEFWNDKRPAGVPDSLDFAAYRSVVEVFERSCKKFADRPAFSNLGVTLSYAELDRLSA 60

Query: 61  AFAAWIQQHTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND 120
           AFAA++Q+ TDLQPGDRIAVQ+PNVLQYPIAVFGA+RAGL+VVNTNPLYTAREM HQF D
Sbjct: 61  AFAAYLQKQTDLQPGDRIAVQMPNVLQYPIAVFGALRAGLVVVNTNPLYTAREMRHQFKD 120

Query: 121 SGAKALVCLANMAHLAEKVVPRTQIRQVIVTEVADMLSPFKRLLINSVIKYVKKMVPAYH 180
           +G +ALV L     L E+V+P T+I  +I   + D+L   K  L+NSV+K VKKMVP Y 
Sbjct: 121 AGVRALVYLNVFGKLVEEVLPDTRIEYLIEARMGDLLPALKGWLVNSVVKSVKKMVPDYR 180

Query: 181 LPKAIKFNDVLGKGRGQPVTDVSPGSVDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCR 240
           LP+A+ F   L +G+G  +  V  G  DVAVLQYTGGTTGV+KGAMLTH NL+ANMLQ  
Sbjct: 181 LPQALPFRQALKQGQGHALQPVRVGLEDVAVLQYTGGTTGVSKGAMLTHGNLVANMLQVH 240

Query: 241 ALMAS-------NLDEGCEIIITPLPLYHIYAFTFHCMAMMLLGNHNILISNPRDLPAMV 293
           A ++         + E  E++I PLPLYHIYAFT +CM MM+ GNHN+LI+NPRD+P  V
Sbjct: 241 AQLSQLGKDGLPLMKEAQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFV 300

Query: 294 KELSKWKFSGFVGLNTLFVALCNSDGFRNLDFSALKVTLSGGMALQQAAAERWKQVTGCQ 353
           KEL KW+FS  +GLNTLFVAL    GF+++DFS LK+T SGG AL  A AERWK VTGC 
Sbjct: 301 KELKKWRFSALLGLNTLFVALMEHPGFKDVDFSNLKLTNSGGTALVSATAERWKGVTGCT 360

Query: 354 VCEGYGMTETSPVATVNP-SQYVQMGSIGIPVPSTLCKVIDDAGNELAFGETGELCIKGP 412
           V EGYG+TE SPV T NP  +  ++G++GIPV  T  KVID+ GNEL  GE GELC+KGP
Sbjct: 361 VVEGYGLTECSPVVTTNPYGEQARLGTVGIPVVGTALKVIDEQGNELPVGERGELCVKGP 420

Query: 413 QVMKGYWQRQEATDEMIDSEGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELE 472
           QVMKGYWQR EAT+E++D+EGWLKTGDIA+I  DG++RIVDRKKD+IL+SGFNVYPNE+E
Sbjct: 421 QVMKGYWQRPEATEEILDAEGWLKTGDIAVIDEDGFVRIVDRKKDLILVSGFNVYPNEIE 480

Query: 473 DVLATLPGVLQCAAIGVPDEKSGETIKVFVVAKPGVTLTKEQVMAHMRANLTGYKVPRSV 532
           DV+   P V  CAA+G+PDEKSGE +K+FVVA+   +L+ E++ A+ + NLTGYK+PR +
Sbjct: 481 DVVMAHPKVASCAAVGIPDEKSGEAVKLFVVAR-DPSLSVEELKAYCKENLTGYKIPRQI 539

Query: 533 EFRDVLPTTNVGKILRRELRD 553
             +D LP T VGKILRRELR+
Sbjct: 540 VLKDALPMTPVGKILRRELRE 560