Pairwise Alignments

Query, 427 a.a., Membrane protein involved in aromatic hydrocarbon degradation from Pseudomonas syringae pv. syringae B728a

Subject, 423 a.a., Long-chain fatty acid transport protein from Pseudomonas fluorescens FW300-N2C3

 Score =  605 bits (1561), Expect = e-178
 Identities = 281/426 (65%), Positives = 348/426 (81%), Gaps = 5/426 (1%)

Query: 4   MTKALNRTTLGLALGLASSQLLAAGFALNEQSISGMGTGFAGRSSSADDASTVFGNPAGM 63
           M + L +T + LA+ LA+SQ+ A+GFALNEQSISGMG+GFAGRSSSA+DASTVFGNPAGM
Sbjct: 1   MKRILLKTPMSLAVALATSQVFASGFALNEQSISGMGSGFAGRSSSAEDASTVFGNPAGM 60

Query: 64  SRIKREQISVGAAAVIAKTDIDNGRGTFGGSNDGDMVPVVGVPMGYYVKPIDDHWAFGLG 123
           SR+K+EQ+S+GAA +  ++DI   R TFGG  DGDMVP   VPMGYYVKP+D+HWA G+G
Sbjct: 61  SRLKKEQVSLGAATLFTQSDISQTRSTFGGREDGDMVPTTTVPMGYYVKPVDEHWAVGVG 120

Query: 124 VYVPFGLVTDYEKGFAGRYWGDKSHVQVVTFQPTVSYAFNDKVSIGFGPTINRIDGELTS 183
            YVPFGL+TDY   FAGRY+G+KS V  +TFQPTVSYAFNDKVSIGFGPTINRI GE++ 
Sbjct: 121 FYVPFGLITDYGSDFAGRYYGNKSEVTTLTFQPTVSYAFNDKVSIGFGPTINRISGEISG 180

Query: 184 ATLNAATPGRNDGKVKIEGDDTAIGFNAGILVQATDTTRLGLTYHSKVDYKLKGKTKIEG 243
              N  +PG NDGK+K  GDDTA+GFNAGILVQATD TRLGLTYHSKV Y L  K+K+ G
Sbjct: 181 MVPNPLSPGSNDGKLKSNGDDTALGFNAGILVQATDQTRLGLTYHSKVSYHLDAKSKLTG 240

Query: 244 SGFGPFG--GQKYDASLDISTPESVDFSITQQIDENWTVYAGSTWTRWSRLQDITVNNDG 301
             F   G  G+ YDASLD+ TPESVD S+T Q++++WT+Y GSTWTRWSR +++T+ N G
Sbjct: 241 GIFSVLGVSGRSYDASLDVDTPESVDISLTHQLNDDWTMYLGSTWTRWSRFKELTIENSG 300

Query: 302 VPALLGGSAGPIGTITEEQNWHDTWAHAIGASYKVNKEWTLRTGFSVDQSPTNNVNRSPR 361
           +PALL G+   + T++EEQNWHDTWAHAIGA+YK+N +W LR G SVDQSP NN NR PR
Sbjct: 301 LPALLSGA---LSTVSEEQNWHDTWAHAIGAAYKLNDQWVLRAGLSVDQSPANNTNRGPR 357

Query: 362 IPTGDRKIISFGAGWSPTDDLTIDVAYSYLREDETKIRDSSATKGSYSADYRNTAHGLGT 421
           IPTGDR ++SFGAGW+P +++TIDVAYSYL+E+  +I ++S+T+G+YS+ YRN+A G GT
Sbjct: 358 IPTGDRTVLSFGAGWTPVEEVTIDVAYSYLQEESVRINETSSTRGAYSSKYRNSASGFGT 417

Query: 422 SVTYRF 427
           SV+YRF
Sbjct: 418 SVSYRF 423