Pairwise Alignments

Query, 686 a.a., Flagellar basal body rod protein:Protein of unknown function DUF1078 from Pseudomonas syringae pv. syringae B728a

Subject, 625 a.a., flagellar hook-associated protein FlgK from Dyella japonica UNC79MFTsu3.2

 Score =  314 bits (804), Expect = 9e-90
 Identities = 221/690 (32%), Positives = 352/690 (51%), Gaps = 76/690 (11%)

Query: 3   LISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVLTTASAQIALGQGVGYIGTGTTLS 62
           L+S G+SG+ AS   ++T+ +N ANV+T GYSRQ V  +A     LG    Y+GTG    
Sbjct: 4   LLSTGVSGLLASQIGLSTVSHNVANVNTDGYSRQTVQFSARPAQQLGNF--YVGTGVNTV 61

Query: 63  DVRRIYNSYLDTQLQSSTALSADALAYSGQASKTDTLLSDSATGISVQLADFFTKMQGIA 122
            V+R Y+ YL+T L ++++  + A  Y    ++ +  LS S T +   L  F+  +  ++
Sbjct: 62  AVQRAYSQYLNTALWTASSDQSRAATYQSLTAQINNQLSGS-TNLQTSLDAFYGALGDVS 120

Query: 123 TSATQSAERSSFLTQAGALSARFNSVSSQLSTQNDNVNTQLDTFTKKVNELTTTLASLNK 182
            +   +A R   L +A AL + F ++S Q +  N  V  Q+      +N  +T++A LN+
Sbjct: 121 NAPADAAARGVLLARANALGSTFQALSGQFNQLNGQVQRQIGDTVDSINSDSTSIAKLNE 180

Query: 183 QITQASA-GNATPNTLLDSRSEAVRQLNELVGVKVVENNGN-FDIYTGTGQSLVSGGTSY 240
           QI  A A G   P+ LLD R   +++++  VGV VV+ + +   ++ G GQSLV+G  +Y
Sbjct: 181 QIRTAYASGKGEPSDLLDQRDALIKKVSGEVGVTVVQQDDHTVSLFVGNGQSLVNGSNAY 240

Query: 241 KMSASPSPSDPLQYNVQIAYGQTQTDVTSVLTGGSIGGLLRYRNEVLVPATNELGRTAMV 300
           +++ +P+  DP +  ++I    + + +T  + GGS+G LL +R  VL PA N+LGR A+ 
Sbjct: 241 QLATAPNQYDPTR--LEIVGKDSGSVITGQVGGGSLGALLDFRTNVLDPAQNQLGRAAVA 298

Query: 301 LSDQVNSQMNQGIDSKGNFGSNLYSSINSADAITQRSIGKTTNSVGSGNLNVTIGDTSKL 360
           ++   N+Q  QG+D  GN G   ++       +    +  + ++ G+G L+  I     L
Sbjct: 299 MASAFNAQHAQGMDLNGNLGGAFFN-------VGAPQVLNSASNQGTGTLSANISGVGAL 351

Query: 361 TANDYEVTFSDSSNFSVRRLPNGE--SVGSGSLADNPPKQFEGFSVSLNGNTLAAGDSFK 418
           TA DY + + D S +S+R          G+G+ AD  P + +G S+ + G   +AGDSF+
Sbjct: 352 TAKDYVLRY-DGSAWSLRDTAGNAVAMTGTGTAAD--PFKADGLSLVVGGAP-SAGDSFQ 407

Query: 419 VIPTRTGASGISVALTDAKDIAAAAPLTATAGSSNSGTGGFTQPVVNTKSDIYDSTQTAD 478
           V PT   A+G   A+TD   IAAAAPL   AGS+ +   G                    
Sbjct: 408 VRPTAAAAAGFGAAITDPNKIAAAAPL---AGSAGAANKG-------------------- 444

Query: 479 LRNALKDSTPMKLVMGAVNSSGVQSYTVIKANGGAVLDQNGNAIGGS--IIQGQANTVKL 536
                               SG          G AV D +   + G+  I+     +  +
Sbjct: 445 --------------------SG-------SIGGIAVTDPSNAGLLGTANIVFTSPTSYTI 477

Query: 537 NVGYTDTTTTPNSKTAFELQMTISGSPVANDTFSIGLTGGGSSDNRNALAVVGLQTAKTV 596
           N G   T T      A    +T++G+P ANDTF++        DN NALA   L     +
Sbjct: 478 NGGAAQTYTPGQPINANGWSLTLNGTPAANDTFTLKANTNARGDNGNALA---LGKVANL 534

Query: 597 GVINGGVGTSLSGSYASTVSVVGTLASQSKNDVTATAAVVSQAKSSRDSVSGVSLDEEAS 656
           GV++ G  TS+  +Y    S VG+  S +K+ +T   AV  QA  S+  VSGV++DEEA+
Sbjct: 535 GVLDNGA-TSVGRAYGQLTSQVGSAGSLAKDALTTQNAVYQQALQSQQGVSGVNIDEEAA 593

Query: 657 NLIKYQQYYTASSQIIKAAQTIFSTLINSL 686
           +L++YQQ Y AS+Q+I  A  IF  L++++
Sbjct: 594 SLVRYQQAYQASAQVISTASQIFDALLSAV 623