Pairwise Alignments

Query, 686 a.a., Flagellar basal body rod protein:Protein of unknown function DUF1078 from Pseudomonas syringae pv. syringae B728a

Subject, 698 a.a., flagellar hook-associated protein FlgK, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  155 bits (392), Expect = 6e-42
 Identities = 183/715 (25%), Positives = 296/715 (41%), Gaps = 58/715 (8%)

Query: 2   SLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVLTTASAQIALGQGVGYIGTGTTL 61
           SL ++G + +N + +AI T GNN ANV+T GYSRQ+V    +    L +  G +G G   
Sbjct: 5   SLFNLGWNALNGAQSAIQTTGNNIANVNTPGYSRQEVRFEEAP--TLDKFGGQMGQGVYA 62

Query: 62  SDVRRIYNSYLDTQLQSSTALSADALAYSGQASKTDTLLSDSAT-GISVQLADFFTKMQG 120
           ++V R +N +L +      +          +    + L +++ T GI+  L  FF   Q 
Sbjct: 63  AEVIRHFNKFLFSSYLDKYSTQQRWEKQYEELQGVENLFNEANTSGINAALTTFFNDWQE 122

Query: 121 IATSATQSAERSSFLTQAGALSARFNSVSSQLSTQNDNVNTQLDTFTKKVNELTTTLASL 180
           ++      + R + L  +  L+    +    +      ++ Q+      VN++  ++A +
Sbjct: 123 LSKRPDDKSVREALLAHSDNLTKLIRNADDTMLRMQQEIDQQIGQDVDAVNDMLRSIADI 182

Query: 181 NKQIT-QASAGNATPNTLLDSRSEAVRQLNELVGVKVVEN-NGNFDIYTGTGQSLVSGGT 238
           N+Q+      G    NTL D R + VR+L E + V VV+N  GN+ + T  GQ+LV G  
Sbjct: 183 NRQLNIHDDPGRNNANTLYDQRDQLVRKLAEKLDVTVVDNGGGNYTVNTKAGQTLVDGTV 242

Query: 239 SYKMSASPSPSDPLQYNVQIAY-------GQTQTDVT-SVLTGGSIGGLLRYRNEVLVPA 290
           +Y++     P    Q     A+       G   ++ T  V+TGG++ G   YR  +    
Sbjct: 243 AYELRFD-GPKSEAQLTTTSAFDGTLEFTGSDSSEYTLEVVTGGAV-GTATYRVSLDGGQ 300

Query: 291 T-------NELGRTAMVLSDQVNSQMNQGIDSKGNFGSNLYSSINSADAITQRSIGKTTN 343
           T       NEL  T         ++  +G+D     G+    S      IT +S G    
Sbjct: 301 TWLKDADGNELHYTTQT---SPTTERVKGLDISFT-GATQPMSAGDRFTITPKS-GLYWV 355

Query: 344 SVGSGNLNVTIGDTSKLTANDYEVT-FSDSSNFSVRRLPNGESVGSGSLADNPPKQFEGF 402
           +     LNVT    S  T N   +T  S  + F+VR    GE         N    +E  
Sbjct: 356 TPTRDPLNVTPQALSDGTDNTSRITGGSLGALFTVRDDKIGEYRDKLDAFAN-TLMWEVN 414

Query: 403 SVSLNG---NTLAAGDSFKVIPTRTGASGISVALTDAKDIAAAAPLTATAGSSNSGTGGF 459
            +   G     LA       +P  T + G   A  +  D      +        +G    
Sbjct: 415 RIHSQGAGLEKLAQSAGTTKVPNTTASLGSPTAGINFHDRLQDGNIGIYVYDKTTGA--- 471

Query: 460 TQPVVNTKSDIYDSTQTADLRNALKDSTPMKLVMGAVNSSG--VQSYTVIKANGGAVLDQ 517
              VVN+ S  + S     L N  KD   ++ V+ A+N+        T    +G  V+D 
Sbjct: 472 ---VVNSGSIDFSSVVPPGLANFSKDDHSLQDVVDAINNDAKFTGLITASIKDGKLVVDG 528

Query: 518 NGNAI-------GGSIIQGQANTVKLNVGYTDTTTTPNSKTAFELQMTISGSPVANDTFS 570
            G+ +        G +     NT     G  D    P  +           + + N    
Sbjct: 529 VGDNVFSFGADSTGVLAALGLNTFFQGSGAADIALRPELR---------QNTGLINAGQV 579

Query: 571 IGLTGGGSSDNRNALAVVGLQTAK-TVGVINGGVGT-SLSGSYASTVSVVGTLASQSKND 628
            G + G S DN +A  +  L T K TV + +   G  SLS  Y+S V+VVG   + +K +
Sbjct: 580 NGASEGNSGDNNSAKEIAALSTKKVTVSMFSSNSGNQSLSEFYSSIVAVVGADTASAKFN 639

Query: 629 VTATAAVVSQAKSSRDSVSGVSLDEEASNLIKYQQYYTASSQIIKAAQTIFSTLI 683
                A+     S   SVSGV+LDEE ++L+K+Q  Y A+++++  A  +F  L+
Sbjct: 640 KAFHQAMSDDIDSRMSSVSGVNLDEEMASLVKFQHSYKAAAKLVTTADEMFQVLL 694