Pairwise Alignments

Query, 594 a.a., Flagellar FliF M-ring protein from Pseudomonas syringae pv. syringae B728a

Subject, 561 a.a., flagellar MS-ring protein (RefSeq) from Shewanella sp. ANA-3

 Score =  320 bits (821), Expect = 8e-92
 Identities = 199/575 (34%), Positives = 311/575 (54%), Gaps = 51/575 (8%)

Query: 27  LENLSEMTMLRQIGLMVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMDTLTAA 86
           L +L  + M+RQI +++ LA  +A+   V++W+Q+P+YRPL G +   +  Q++D L   
Sbjct: 23  LGSLGGVDMMRQITMILALAICLALAVFVMIWAQEPEYRPL-GKMETQEMVQVLDVLDKN 81

Query: 87  NINYTVEPNSGALLVKSDDVQRARIQLAQAGVVQNDANIGFEILDKDQGLGTSQFMEATR 146
            I Y +E +   + V  D  Q  ++ L++AGV    A+   + L +D G G SQ ME  R
Sbjct: 82  KIKYQIEVD--VVKVPEDKYQEVKMMLSRAGVNSPAASTQ-DFLTQDSGFGVSQRMEQAR 138

Query: 147 YRRGLEGELARTISALNNVKGARVHLAIPKSSVFVRDDRKPSASVLVELYAGRSLEPSQV 206
            +   E  LAR I  L +V  A+V LA+PK +VF R+  +PSA+V++    G  L   +V
Sbjct: 139 LKHSQEENLARAIEQLQSVSRAKVILALPKENVFARNTSQPSATVVINTRRG-GLGQGEV 197

Query: 207 MAIINLVATSVPELSKSQITVVDQKGALLSDQAENSELTMAGKQFDYSRRMEGMLTQRVQ 266
            AI+++VA++V  L  S++TV D  G LL+  +++     A ++ +  ++ E     ++ 
Sbjct: 198 DAIVDIVASAVQGLEPSRVTVTDSNGRLLNSGSQDGISARARRELELVQQKEAEYRTKID 257

Query: 267 NILQPILGNDRYKAEVSAVVDFSAVESTAESFNPDQPALRSEQSVNEQRSSSSSSGGVPG 326
           +IL PILG D + ++V   +DF+AVE TA+ FNPD P+LRSE +V E  S+  S+GG+PG
Sbjct: 258 SILSPILGPDNFTSQVDVSMDFTAVEQTAKRFNPDLPSLRSEMTV-ENNSTGGSTGGIPG 316

Query: 327 ALSNQPPGPATAPQTAGGGAAGAAGPIAPGQPLLDANGQQIMDPATGQPALAPYPADKRV 386
           ALSNQPP  +  PQ A      A   +  G                          +   
Sbjct: 317 ALSNQPPMESNIPQDA----TKATESVTAG--------------------------NSHR 346

Query: 387 QSTKNFELDRSISHTKQQQGRLTRLSVAVVVDDMVKTNAANGEVTRAPWSAADLARFTRL 446
           ++T+NFELD +ISHT+QQ G + R+SV+V VD        NG+V R   +  +L    RL
Sbjct: 347 EATRNFELDTTISHTRQQIGVVRRVSVSVAVDFKPGAAGENGQVARVARTEQELTNIRRL 406

Query: 447 VQDAVGFDASRGDSVSVINVPFSSERAEVLPEASFYSQPWFWDIVKQAVGVIFILILVFG 506
           ++ AVGF A RGD + V+ VPF  +  E +P    + QPWFW  VK  +G + IL+L+  
Sbjct: 407 LEGAVGFSAQRGDVLEVVTVPFMDQLVEDVPAPELWEQPWFWRAVKLGIGALVILVLILA 466

Query: 507 VLRPVLNNITNGKRKELAGFGGDAELGG-MGGLDGELSNDRV----------SLGGPQSI 555
           V+RP+L  +      +      D+ LG  +  ++ + + D +          S     SI
Sbjct: 467 VVRPMLKRLI---YPDSVNMPEDSRLGNELAEIEDQYAADTLGMLNTKEAEYSYADDGSI 523

Query: 556 LLPSPTEGYDAQLNAIKSLVAEDPGRVAQVVKEWI 590
           L+P+  +  D  + AI++LVA +P    QVVK W+
Sbjct: 524 LIPNLHKD-DDMIKAIRALVANEPELSTQVVKNWL 557