Pairwise Alignments

Query, 261 a.a., Flagellar biosynthesis protein FliR from Pseudomonas syringae pv. syringae B728a

Subject, 262 a.a., flagellar biosynthesis protein FliR (RefSeq) from Shewanella amazonensis SB2B

 Score =  215 bits (548), Expect = 7e-61
 Identities = 111/255 (43%), Positives = 166/255 (65%), Gaps = 2/255 (0%)

Query: 4   MLALTDTQISTWVASFMLPLFRIIALLMTMPIIGTTLVPRRVRMYLAVAITVVVAPALPA 63
           M  L DT + T + ++  PLFRI A+ M MP+ G    P RVR+ L+VA+T  V+P LP 
Sbjct: 1   MDVLLDTLMET-IKAYTWPLFRISAMFMVMPVFGANTTPVRVRLLLSVAVTFAVSPMLPP 59

Query: 64  MPPVQALDLSALLLIGEQIIIGAGMGLSLQLFFHIFVIAGQIISTQMGMGFASMVDPTNG 123
           MP  +   LS++ +  +Q++IG  MGL   +   IFV+ GQII  Q  +GF+ MVDP +G
Sbjct: 60  MPQGELFALSSVFISAQQVLIGVAMGLVALMMLQIFVLTGQIIGMQTSLGFSFMVDPGSG 119

Query: 124 VSSATIGQFFTMLVTLLFLAMNGHLVVLEVLVESFTTMPVG-SGLLVNNFWELANGLGWV 182
             +  +G FF +L TL+FLA++GHL ++ +LV SF T+PV  +G+ + N+  LA    ++
Sbjct: 120 QQTPVLGNFFLLLATLIFLAVDGHLTMIRMLVMSFDTLPVSMTGITLANYHSLALWGSYM 179

Query: 183 LASGLRLVLPAITALLIINIAFGVMTRAAPQLNIFSIGFPLTLVLGMVILWMTMGDMLNQ 242
             + L + L AI ALL+IN++FGVMTRAAPQLNIF+IGFP+ ++ G+ ILW+T+  +++ 
Sbjct: 180 FGAALTMSLSAIVALLLINLSFGVMTRAAPQLNIFAIGFPVVMISGLFILWLTLAPVMSH 239

Query: 243 YQPIATQALQALRDM 257
           +  I   A   L D+
Sbjct: 240 FGEIWEAAQVLLCDI 254