Pairwise Alignments

Query, 295 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

Subject, 294 a.a., flagellar motor protein MotD from Pseudomonas fluorescens FW300-N2C3

 Score =  463 bits (1191), Expect = e-135
 Identities = 229/294 (77%), Positives = 256/294 (87%), Gaps = 1/294 (0%)

Query: 1   MARRRQVEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTE 60
           MARRR  EEH NHERWLVSYADFITLLFAFFVVMYSISSVNEGKYK++S+AL+GVF D++
Sbjct: 1   MARRRHREEHVNHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKVISEALIGVFTDSD 60

Query: 61  RTMKPIPIGEQRPVSIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGDLIKSDQ 120
           R +KPIPIGE+RP +  PA+PLVKDSEQ DAGI   S DPL++IA D+  AFGDLI S+Q
Sbjct: 61  RALKPIPIGEERPKTTTPAKPLVKDSEQVDAGIA-GSSDPLKSIADDISAAFGDLISSNQ 119

Query: 121 MTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGFTDDQPI 180
           MTVRGNELW+EIELNSS+LFGSGDAMPSD AF II+KVA I+K FDNPIHVEGFTDDQPI
Sbjct: 120 MTVRGNELWVEIELNSSLLFGSGDAMPSDMAFNIIDKVAAILKPFDNPIHVEGFTDDQPI 179

Query: 181 STAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIVPNTSTAGRAKNRRVV 240
            TAQ+PTNWELSSARSASIVRMLAM GVNP RLASVGYGEFQP+  N +  GRA+NRRVV
Sbjct: 180 RTAQYPTNWELSSARSASIVRMLAMQGVNPGRLASVGYGEFQPVANNATAEGRARNRRVV 239

Query: 241 LVISRNLDIRRSLTSAGSANVQPDAALRRAGTQTAPVPAKPPVRANAVNSPSPA 294
           LV+SRNLD+RRSLT  G+AN  PDAAL+RAGTQTAP P K P R +AVNSPSPA
Sbjct: 240 LVVSRNLDVRRSLTGTGTANATPDAALKRAGTQTAPAPVKSPGRQSAVNSPSPA 293