Pairwise Alignments

Query, 295 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

Subject, 260 a.a., flagellar motor protein MotD from Marinobacter adhaerens HP15

 Score =  262 bits (669), Expect = 7e-75
 Identities = 133/259 (51%), Positives = 187/259 (72%), Gaps = 6/259 (2%)

Query: 1   MARRRQVEEH-ENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDT 59
           M RRRQ ++   N ERWL+SYADFITLLFAFFVVMYS+SSVNEGKYK+LS+ L GVFN  
Sbjct: 1   MRRRRQPQDDLHNKERWLISYADFITLLFAFFVVMYSVSSVNEGKYKVLSETLTGVFNAP 60

Query: 60  ERTMKPIPIGEQRPVSIK-PAE----PLVKDSEQTDAGIGQASDDPLQTIAQDVRDAFGD 114
           +R+ +PI IG+Q   S+  PAE    P V ++ +      QA  + L+ +A  +   F +
Sbjct: 61  QRSFQPIEIGDQPQRSLNAPAENVIPPAVTEAPRNPEMDAQARTEALRAMADQLSMEFDE 120

Query: 115 LIKSDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGF 174
           LI    +++  ++ W+E+ L +S+LFGSGDA P   AF ++EK+A ++   DN + VEGF
Sbjct: 121 LINQGVVSLETSDQWLELNLPNSLLFGSGDAEPHYDAFEVVEKIATVLNNRDNAVKVEGF 180

Query: 175 TDDQPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIVPNTSTAGRA 234
           TD+QPIST++FP+NWELS+AR+A++VRML M+G+ P RLA+VGYG++QP+  N +  GR 
Sbjct: 181 TDNQPISTSRFPSNWELSAARAAAMVRMLVMEGIEPERLAAVGYGQYQPVSRNDTEEGRR 240

Query: 235 KNRRVVLVISRNLDIRRSL 253
           +NRRVVL+ISR+  IR ++
Sbjct: 241 RNRRVVLLISRDASIRGAM 259