Pairwise Alignments

Query, 295 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

Subject, 275 a.a., chemotaxis motB protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  108 bits (271), Expect = 1e-28
 Identities = 72/266 (27%), Positives = 132/266 (49%), Gaps = 27/266 (10%)

Query: 3   RRRQVEEHENHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKILSQALVGVFNDTERT 62
           ++++V+  ENHERWL+SYADF+TLLFA FVV+YS +  ++ + K + + L+   +     
Sbjct: 2   KKKKVDPPENHERWLISYADFMTLLFALFVVLYSFAMSDKNEAKFMVEGLIDSLSKIGLI 61

Query: 63  MKP---------IPIGEQRPV-SIKPAEPLVKDSEQTDAGIGQASDDPLQTIAQDVRDAF 112
             P           I E   V S   AEP + ++  T     ++++D     + D    +
Sbjct: 62  STPAVNALAPGGTSILEPNTVTSAVDAEPKLIETATTAPSTSESNNDLTNAKSNDTIRKY 121

Query: 113 GDLIKSDQMTVRGNELWIEIEL------------NSSMLFGSGDAMPSDKAFTIIEKVAG 160
            ++I +       N+   E+E+            +++  F SG A    K   +I+K+  
Sbjct: 122 KEIISAKLKNEIENQ---EVEIDEVSDNLIIRIGDNNTFFASGSAFIQPKFIPLIDKIGE 178

Query: 161 IVKRFDNPIHVEGFTDDQPISTAQFPTNWELSSARSASIVRMLAMD-GVNPARLASVGYG 219
           ++      + + G T D  +    +  NW+LSS R+ ++VR++  + GVNP+R+   G  
Sbjct: 179 VIASVPGRVVIAGHT-DATLPMEIYADNWDLSSLRATAVVRIMTKNKGVNPSRIIVQGLA 237

Query: 220 EFQPIVPNTSTAGRAKNRRVVLVISR 245
           + QP   N +   R KNRR+ +++++
Sbjct: 238 DTQPRFQNDTPEHRQKNRRIEIILNQ 263