Pairwise Alignments

Query, 311 a.a., monosaccharide ABC transporter substrate-binding protein, CUT2 family from Pseudomonas syringae pv. syringae B728a

Subject, 314 a.a., D-ribose ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

 Score =  137 bits (345), Expect = 3e-37
 Identities = 94/305 (30%), Positives = 161/305 (52%), Gaps = 12/305 (3%)

Query: 8   TSLAMALMLGSGAALADIKIGVSMSQFDDTWLTYLRDDMSAKAKVMSTTEKVDLQFVDAR 67
           T +A     GS ++    K+ + +S  ++ +   LRD   A AK +     VDL   DA+
Sbjct: 21  TLMAGTAACGSTSSSGGDKVALLVSTLNNPFFVDLRDGAQAAAKDLG----VDLMVSDAQ 76

Query: 68  ADVNKQLDQVKDLINKKVDALIVNPVDTAATARITKEAVAAGIPLVYVNRRPDDLNLPAG 127
            D + Q +Q ++  ++   A+I+NPVD+ A +      +++ +P++ V+R     ++ + 
Sbjct: 77  NDSSTQQNQAQNAQSQGAKAVIINPVDSDAASPAVAPLLSSSLPVISVDRSVTGEDVTSH 136

Query: 128 VATVTSDDVEAGRLQAQYIADKMKDKGDVMILLGDLANNSTQNRTKGVKEVLDKYPDIKI 187
           +A   SD+V  G   A  +A  + +KG V+IL G     ST++R  G K+ + KY  I++
Sbjct: 137 IA---SDNVAGGAQAADELAKAVGEKGKVIILQGTPGAASTRDRGDGFKKEIKKYSGIEV 193

Query: 188 EEEQTGTYLRQKGMDLTNDWLTQGRKFNAVLANNDEMAIGAAMAL-KQAGVEKGSILIAG 246
             EQT  + R + +D+T + +        + A NDEMA+GA  +L  +AG +   + I G
Sbjct: 194 VAEQTANFDRAEALDVTTNLMQSNPDVVGIYAENDEMALGAIQSLGSKAGAD---VKIFG 250

Query: 247 VDGTPDGLNAVTKGDLAVSVYQDAKGQADGAIDAAVKLARKEKIEPQAIIIPYRLITPEN 306
            DGT DGL AV+ G +  ++ Q  K     A++AAVK  + E +E +   I  + +T  N
Sbjct: 251 FDGTEDGLKAVSNGTMVGTIAQQPKELGKKAVEAAVKAIKGESVE-KTESIEVKTVTKGN 309

Query: 307 VATFK 311
           VA F+
Sbjct: 310 VADFQ 314