Pairwise Alignments

Query, 489 a.a., NADH dehydrogenase subunit N from Pseudomonas syringae pv. syringae B728a

Subject, 513 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Synechococcus elongatus PCC 7942

 Score =  118 bits (296), Expect = 4e-31
 Identities = 104/384 (27%), Positives = 175/384 (45%), Gaps = 15/384 (3%)

Query: 110 YLLILLAAAGGLVLVSAQHLAGLFIGLELLSVPVYGLVAYAFFNKRSLEGGIKYMVLSAA 169
           Y LI LAAAG  + + ++ L    +G EL  +P+Y L++     +R      ++++ +A 
Sbjct: 108 YSLIFLAAAGMAIALLSRDLLLFVLGYELELIPMYLLISIWGGEQRG-PAATRFLIFTAI 166

Query: 170 GSAFLLFGM---ALLYAEAGSLSFDGIGKAIAATGMPSPIASLGLGMMVVGLAFKLSLVP 226
               LL G    A+L ++  S +FD +        +  P+    L + V   A KL LVP
Sbjct: 167 SGILLLLGAIATAVLSSQPFSFAFDQLQTIELPLALQLPL----LLLFVAAFAIKLPLVP 222

Query: 227 FHLWTPDVYEGAPAPVAAFLATA-SKVAVFAVLVRLFQISPAASSGVLHDVLAVIAVASI 285
           FH W P  Y  A   +A  L  A +K+  + +        P A S ++   LAV+A  + 
Sbjct: 223 FHSWQPAAYGQASPAIAMLLGGAIAKLGGYGLFRFGCSFFPEAWS-LIAPSLAVLAAVTA 281

Query: 286 LVGNLLALTQTNLKRLLGYSSIAHFGYLMIALVASKGMAVEAIGVYLATYVLTSLGSFGV 345
           L G+L AL QT+L+RL+ +SSI H G L++AL A   +A++     +  + L     F +
Sbjct: 282 LYGSLNALRQTDLQRLVAFSSIGHMGTLLLALAAGTPLALQGAIAQMVAHGLILALLFQL 341

Query: 346 ITMMSSPYSGRDADAMFEYRGLFWRRPYLTAVMTLMMLSLAGIPLTAGFIGKFYIIATGV 405
           +  +      RD D +          P    ++ L  ++ AGIP   GF+ +F I     
Sbjct: 342 VGTIERVTGRRDRDQLSGLLNPIRGLPLTAGLLLLAAMASAGIPGLVGFVAEFLIFQGSF 401

Query: 406 ESQLWWLVGALVIGSAIGVFYYLRVMVTMY-LVDNKLPRHDAAINWAQRTGGVMLLAVAI 464
               W  VG +       V++   +    +  +DN+  R    +  ++R   V+L   A+
Sbjct: 402 AIFPWATVGCIAASGLTAVYFVSLINRACFGKLDNQEARW-RPVTVSERWPAVVL---AL 457

Query: 465 LTFVLGVYPQPLLDLVLNAGLHVA 488
               LG+ PQ L+    ++ L +A
Sbjct: 458 TVMALGLAPQGLVRWSESSSLAIA 481