Pairwise Alignments

Query, 510 a.a., NADH dehydrogenase subunit M from Pseudomonas syringae pv. syringae B728a

Subject, 496 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Synechococcus elongatus PCC 7942

 Score =  287 bits (734), Expect = 7e-82
 Identities = 184/488 (37%), Positives = 268/488 (54%), Gaps = 27/488 (5%)

Query: 2   ILPWLILIPFIGG--LLCWLGERFGSTLPRWIALLT-MTLELVLGLWLWATGNFGYAPVP 58
           +L  LI +P +    LLCW G    +   R  A+     L + + L+      F + P  
Sbjct: 1   MLSALIWLPIVAATVLLCWPGTLSAAWAQRSAAIAAGAALAIAIALF------FQFDP-- 52

Query: 59  GADPTWTLEFHHPWITRFGIDVHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRKVGFFH 118
                W L    PWI + G+   L +DGLSL ++ L  LL  L +    ++ QR   ++ 
Sbjct: 53  -QIHDWQLLEQLPWIEQLGLGYRLGVDGLSLPLVGLNALLTFLIIAGLERQEQRSRLYYG 111

Query: 119 LNLMWILGGVVGVFLAIDLFMFFFFWEMMLVPMYFLIALWGHSSSDGKKTRIYAATKFFI 178
           L L+ + G V G FLA DL +FF F+E+ L+P+Y LI++WG +       R YAATKF I
Sbjct: 112 LMLL-LSGAVSGAFLAQDLLLFFVFYEVELIPLYLLISIWGGAR------RGYAATKFLI 164

Query: 179 FTQASGLIMLVAILGLVLVHFNQTGVITFAYADLLKTKLAPGTEYILMLGFFIAFAVKLP 238
           +T  SG ++L+  L L ++    +G  +FAY   L   L    +  L++   +AF +K P
Sbjct: 165 YTALSGALLLIGFLALTIL----SGAGSFAYNPNLAAVLPIAQQVTLLVLILVAFGIKTP 220

Query: 239 VVPLHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLV 298
           +VP H+WLPDAH +A T  S+ LAG+LLK   YG+LRF L LFP      AP    L +V
Sbjct: 221 IVPFHTWLPDAHVEASTPVSMMLAGVLLKLGTYGILRFGLGLFPQVWPIVAPWLAGLAVV 280

Query: 299 GIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGVLIQMIAHGLSAAALF 358
              YG+  A  Q D+K+++A+SS+ HMG++L+   + +  +L G + QMI+HGL +A LF
Sbjct: 281 STLYGSLSAIVQQDMKKMVAYSSIGHMGYILLAAAAATPLSLLGAVCQMISHGLISALLF 340

Query: 359 ILSGQLYERLHTRDMREMGGLWSRIAYIPAI-SLFFAA--ASLGLPGTGNFVGEFLILLG 415
           +  G +Y R  TRD+R + GL +    +P + SL   A  AS GLPG   F+ EF+I  G
Sbjct: 341 LEVGFVYSRTGTRDLRVLQGLLTPERGLPIVGSLMILAVMASGGLPGMVGFIAEFMIFRG 400

Query: 416 SFASSPWITAIATSGLVFGSVYSLIMIHRAYFGPSKSD-EVLKGMDGREMIMVLGLAVLL 474
           SF++    T     G    SVY L++++RA+FG      E L  +  RE I  L LA L+
Sbjct: 401 SFSTFTVQTLFCMVGTGLTSVYFLLLVNRAFFGRLPDQMETLPNVALREHIPALMLATLI 460

Query: 475 VVLGVFPQ 482
           V+ GV PQ
Sbjct: 461 VIFGVQPQ 468