Pairwise Alignments

Query, 617 a.a., NADH dehydrogenase subunit L from Pseudomonas syringae pv. syringae B728a

Subject, 727 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Xanthomonas campestris pv. campestris strain 8004

 Score =  346 bits (887), Expect = 2e-99
 Identities = 235/723 (32%), Positives = 351/723 (48%), Gaps = 118/723 (16%)

Query: 2   NLLFLTFVFPLIGFLLLSFSRGRISENLAALIGVGSIGLSAIVTAWVIWQFNVAPPEGGH 61
           +LL    + PL+G ++      ++    A  + +  + +S +++   ++Q  +       
Sbjct: 8   SLLIAVVLAPLVGSIVAGLFGRQVGRKGAQYVTILGVAVSCVLSCLTLYQ--LVELGASP 65

Query: 62  YSQVLWRWMDVDGFQPNFALYLDGLSVTMLGVVVGVGFLIHLFASWYMRGEAGYSRFFSY 121
           ++Q L+ + DV  +  +    +D L+  M+ VV  V  L+H++   YM  + GY RFFSY
Sbjct: 66  FNQNLYTFFDVGNYSAHVGFMVDRLTAMMMVVVTFVSLLVHIYTIGYMEEDPGYQRFFSY 125

Query: 122 TNLFIASMLFLILGDNLLFIYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDV 181
            +LF  SML L++ +N L ++FGWE VGL SYLLIGF++       A +KAF+V R+GD 
Sbjct: 126 ISLFTFSMLTLVMSNNFLQLFFGWEAVGLVSYLLIGFWFKRPTAVFANMKAFLVNRVGDF 185

Query: 182 FMAIGLFILFQQLGTLNVQELLVRAPE------HFKVGDFWIV--LATLMLLGGAVGKSA 233
              +G+  +    G+L+   +   A            G  W V  L  + L  GA+GKSA
Sbjct: 186 GFILGIAGVLLWFGSLDYSTVFANATTMAGAKVQLFAGHEWSVMTLICICLFIGAMGKSA 245

Query: 234 QLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFALAPDILHLVGIVGGVTL 293
           Q+PL  WL D+M GPTP+SALIHAATMVTAG++++AR   LF L+   L+ +  +G  T 
Sbjct: 246 QVPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVARMSPLFELSETALNFILFIGATTA 305

Query: 294 VLAGFAALVQTDIKRILAYSTMSQIGYMFLALGVGAWEGAIFHLMTHAFFKALLFLASGA 353
              G   +VQ DIKR++AYST+SQ+GYM +ALGV A+  A+FHLMTHAFFKALLFLA+G+
Sbjct: 306 FFTGLIGIVQNDIKRVVAYSTLSQLGYMTVALGVSAYSAAVFHLMTHAFFKALLFLAAGS 365

Query: 354 VIVACHHEQNIFKMGGLWKKLPLAYASFIVGGAALSALPLLTAGFYSKDEILWEAFASGN 413
           VI+  HHEQ++ KMGGL K + + Y + ++G  AL   P  + GFYSKD I+  A    +
Sbjct: 366 VIIGMHHEQDMRKMGGLRKYMKVTYWTSVIGTLALVGTPFFS-GFYSKDTIIEAAAHHAH 424

Query: 414 NGL-------LYAGLVGAFMTSLYTFRLIFIAFHGE-----------------AKTEAHA 449
                      +A L G  +TS Y+FRL+F+ FHG+                 A T+A A
Sbjct: 425 ESHSWIATYGYWAVLGGVLVTSFYSFRLLFLTFHGKERFRDAHAHDVHAHHDSAHTDAEA 484

Query: 450 ---------------------GHGIAH-------------W---LPLSVLIVLSTFIGAL 472
                                GHG  H             W   LPL +L + S  IG  
Sbjct: 485 QVHTHDSHGHDAHDAHGHDDHGHGHGHHGAHEPHEPHESKWVVTLPLILLAIPSVAIGFF 544

Query: 473 ITPPL------------------------------------AGVLPQSVGHAGGEAKHSL 496
              P+                                     G L +        A H +
Sbjct: 545 TIGPMLFGTDWQGHHAAHAMKGQAVSFFTGIVDFYDPARDTVGALAEEFHGPVAFALHGM 604

Query: 497 EIASGAIALAGILLAALLFLGKRRLATAIANSAPGRFLSAWWFAA--WGFDWIYDKLFVK 554
             A   + +AG+LLAAL +L K  LAT    +    F    W     +GFD ++   F  
Sbjct: 605 MAAPFFLTVAGLLLAALFYLWKPELATKSRKA----FAPIVWLLENKYGFDKLWINGFAG 660

Query: 555 PYLAISHVLRSDPFDRTIGLI----PRLVKGGHDTMSRTETGQLRWYAASIAVGAVLVLG 610
             + +    R+       G+      RL+      + RT++G L  YA ++ +G + +L 
Sbjct: 661 GGVVLGKASRAIDTHVVDGVAVNGSARLIDLAAHLLRRTQSGFLYHYAFAMIIGLIALLA 720

Query: 611 AVV 613
            ++
Sbjct: 721 VLM 723