Pairwise Alignments

Query, 617 a.a., NADH dehydrogenase subunit L from Pseudomonas syringae pv. syringae B728a

Subject, 490 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  142 bits (357), Expect = 4e-38
 Identities = 139/477 (29%), Positives = 214/477 (44%), Gaps = 50/477 (10%)

Query: 16  LLLSFSRGRISENLAALIGVGSIGLSAIVTAWVIWQFNVAPPEGGHYSQVLWRWMDVDGF 75
           + L+  R R+ E +  +  + +    A +T  V+         GG  + V+   MD    
Sbjct: 23  IALNAKRPRLGEAIGVIAALLTFAQVAALTPTVL--------AGGRPTLVMLSVMDTIPL 74

Query: 76  QPNFALYLDGLSVTMLGVVVGVGFLIHLFASWYMRG--EAGYSRFFSYTNLFIASMLFLI 133
                  LD L +    V   +     L++  Y+R   EA   RF +Y  L IA  L + 
Sbjct: 75  ----VFTLDPLGLLFALVAAALWIPAGLYSIAYLRANHEAHQPRFHAYFALAIACTLGIA 130

Query: 134 LGDNLLFIYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDVFMAIGLFILFQQ 193
           L  NL  ++  +E + L +Y LI       + G A        R G ++M +   +L   
Sbjct: 131 LAGNLFTLFLFYEALTLSTYPLI------THQGTAQ-----AVRAGRIYMGM---LLVPS 176

Query: 194 LGTLNVQELLVRA--------PEHFKVG--DFWIVLATLMLLGGAVGKSAQLPLQTWLAD 243
           +G L V  +L  +        P     G  D  +V   L L      K+A +P   WL  
Sbjct: 177 IGLLLVAIILTHSLAGRMDFQPGGILAGRIDGPLVGLLLALFVFGTAKAALMPFHRWLPA 236

Query: 244 AMAGPTPVSALIHAATMVTAGVYLIART----HGLFALAPDI-LHLVGIVGGVTLVLAGF 298
           AM  PTPVSAL+HA  +V AGV+ IA+      G+  LA       +  V G++++LA  
Sbjct: 237 AMVAPTPVSALLHAVAVVKAGVFTIAKVVISIFGIDLLAASSWTGWLTWVAGISVILASL 296

Query: 299 AALVQTDIKRILAYSTMSQIGYMFLALGVGAWEGAI---FHLMTHAFFKALLFLASGAVI 355
            AL Q ++KR LAYST+SQ+ Y+ +AL + +  G +    H++ HAF K  LF A+GA+ 
Sbjct: 297 IALRQDNLKRRLAYSTISQLAYVVMALSLFSPLGVLAAGLHIVVHAFGKITLFFAAGAIH 356

Query: 356 VACHHEQNIFKMGGLWKKLPLAYASFIVGGAALSALPLLTAGFYSKDEILWEAFASGNNG 415
            A  H+ ++ +  G+ + +P    +F V   ++  LP  TAGF SK  I   AF     G
Sbjct: 357 TAT-HKDSVSQFAGIGRAMPWTMGAFAVASLSMIGLP-PTAGFLSKWGIFSAAFQGQTWG 414

Query: 416 LLYAGLVGAFMTSLYTFRLIFIAFHGEAKTEAHAGHGIAHWLPLSVLIVLSTFIGAL 472
           ++   +    + + Y   ++  AF      E  AG  IA   PL V  +  T  G L
Sbjct: 415 VVAVLIASTVLNAAYFLPILHTAFLKPPPGE--AGAKIAEAPPLMVAALCLTAFGTL 469