Pairwise Alignments

Query, 617 a.a., NADH dehydrogenase subunit L from Pseudomonas syringae pv. syringae B728a

Subject, 643 a.a., NADH-plastoquinone oxidoreductase, chain 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  383 bits (984), Expect = e-110
 Identities = 245/651 (37%), Positives = 357/651 (54%), Gaps = 48/651 (7%)

Query: 3   LLFLTFVFPLIGFLLLSFSRGRISENLAALIGVGSIGLSAIVTAWVIWQFNVAPPEGGHY 62
           L FL    PL+  +   F    + +  A  +    + +SA+ + ++ +   +    G + 
Sbjct: 2   LYFLAVFLPLLTAIATGFFGRALGDKGAQRLTCLGMAISALFSWFIFFDTALG---GNNT 58

Query: 63  SQVLWRWMDVDGFQPNFALYLDGLSVTMLGVVVGVGFLIHLFASWYMRGEAGYSRFFSYT 122
           +  L+ W+       ++AL +D LS  ML VV  + F++H+++  YM  +A   RF +Y 
Sbjct: 59  TVTLFTWVISGDLHFDWALKIDTLSAVMLMVVTTISFMVHIYSVGYMHHDASVPRFMAYL 118

Query: 123 NLFIASMLFLILGDNLLFIYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDVF 182
           +LF   ML L+  DNL+ ++FGWEGVGL SYLLIGF+Y   +   AA+KAF+V R+GD  
Sbjct: 119 SLFTFFMLMLVTADNLVQMFFGWEGVGLASYLLIGFWYEKPSANAAAIKAFVVNRVGDFG 178

Query: 183 MAIGLFILFQQLGTLNVQELLVRAPEHFK-----VGDFW--IVLATLMLLGGAVGKSAQL 235
             +G+F +F   GT+ +  +   A +H        G  W  + +  L+L  GA+GKSAQL
Sbjct: 179 FTLGIFGVFFVFGTVGLDAIFAGAAQHANDVVTFFGIEWHAMTILCLLLFIGAMGKSAQL 238

Query: 236 PLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFALAPDILHLVGIVGGVTLVL 295
            L TWL DAM GPTPVSALIHAATMVTAGV+++AR   LF L+   + +V IVG  T + 
Sbjct: 239 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFMVARMSPLFVLSDTAMTVVTIVGASTAIF 298

Query: 296 AGFAALVQTDIKRILAYSTMSQIGYMFLALGVGAWEGAIFHLMTHAFFKALLFLASGAVI 355
           A     VQ DIKR++AYST SQ+GYMF ALGVGA+   IFHLMTHAFFKALLFL +G+VI
Sbjct: 299 AATVGCVQNDIKRVIAYSTCSQLGYMFFALGVGAFGAGIFHLMTHAFFKALLFLGAGSVI 358

Query: 356 VACHHEQNIFKMGGLWKKLPLAYASFIVGGAALSALPLLTAGFYSKDEILWEAFASGNNG 415
            A   EQ++ +MGG+W+ +PL YA   +G  AL  +P   AGF+SKD IL  A+A+    
Sbjct: 359 HAMSDEQDMRRMGGIWRMVPLTYALMWIGSLALMGVPPF-AGFFSKDMILEVAYAAHGGA 417

Query: 416 LLYA---GLVGAFMTSLYTFRLIFIAFHGEAKTEAHAGHGIAH--------WLPLSVLIV 464
             YA   G++ A +T+ Y+ RLI + FHG  + + H    +AH         LPL VL +
Sbjct: 418 GAYAFWLGILAATLTAFYSTRLIIMTFHGAPRADEHV---MAHVHESPRVMTLPLIVLAI 474

Query: 465 LSTFIGALITPPLAG---------VLPQS---VGHAGGEAKHSLEIASGAIALAGILLAA 512
            +   G L      G          + QS   V H   +    +++    +   G+ L  
Sbjct: 475 GAVVAGGLGADAFIGDGRFAFWGTAIAQSAEDVTHHAHDVPGWVKLLPLVVTALGVGLGV 534

Query: 513 LLFLGKRRLATAIANSAPG--RFLSAWWFAAWGFDWIYDKLFVKPYLAISHVLRSDPFDR 570
            L+  + +L   +A SAPG  RFL   W+    FD +YD++F+KP   +      D    
Sbjct: 535 FLYGVRPKLPAKLAASAPGLYRFLLNKWY----FDELYDRIFIKPAFLLGRGFWKDGDGA 590

Query: 571 TI-GLIPRLVKGGHDTMS----RTETGQLRWYAASIAVGAVLVLGAVVLVA 616
            I G+ P  V     +++    R +TG L  YA ++  G   V+  V++ +
Sbjct: 591 IIDGVGPDGVASATRSLARWFGRMQTGYLYHYAFAMITGIAGVVTWVMVTS 641