Pairwise Alignments

Query, 169 a.a., NADH dehydrogenase subunit J from Pseudomonas syringae pv. syringae B728a

Subject, 205 a.a., NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 (NCBI) from Rhodospirillum rubrum S1H

 Score = 76.3 bits (186), Expect = 3e-19
 Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 14/165 (8%)

Query: 5   FYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAGAIM 64
           FY  + I V S   V+ + NPVH++L+LI++ +  A  F  +GA F  ++ V+ Y GA+ 
Sbjct: 8   FYMLAAIMVASAFMVVISRNPVHSVLWLILTFVNSAGLFLLMGAEFVAMVVVVVYVGAVA 67

Query: 65  VLFVFVVMMLNLGPASVQQERAWLKPGIWIGPVILGALLLAELLYVL---FANPTGAGVG 121
           VLF+FVVMML++    +++      P   +G   +G +LLAE+  +       P   G+ 
Sbjct: 68  VLFLFVVMMLDINYLRLREGFLSYMP---LG-AAMGVVLLAEIAVLAGGWAMAPDAMGLR 123

Query: 122 HTTV-------DAKAVGISLFGPYLLVVELASMLLLAAAITAFHL 159
              +       + +A+G  L+  Y+ + + A ++LL A I +  L
Sbjct: 124 RVPMVDPAALTNTQAIGQVLYTDYIYLFQAAGLVLLVAMIGSIML 168