Pairwise Alignments

Query, 335 a.a., NADH dehydrogenase subunit H from Pseudomonas syringae pv. syringae B728a

Subject, 323 a.a., Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 38/332 (11%)

Query: 14  AVVKAIVVLLAVVV---------CGALLSFIERRLLGWWQDRYGPNRVGPFGMFQIAADM 64
           ++V+ + VL A VV          G  L   +RR+    Q R G   + PF       D+
Sbjct: 4   SLVQTLSVLFAAVVFPGGIFAITLGLALKGFDRRVFARLQRRVGAPLLQPF------YDV 57

Query: 65  LKMFFKEDWTPPFADKVIFTLAPVVAMSALLIAFAVIPITPTWGVADLNIGLLFFFAMAG 124
           LK+  K    P  A+ V+F + P++ ++++ +A A+IPI   +  +     LL  F +  
Sbjct: 58  LKLMTKRTLVPENANLVVFLMVPLLGLASMGVAAAMIPIPGLYDPSPAFGDLLVLFYLLS 117

Query: 125 LSVYAVLFAGWSSNNKFALLGSLRASAQTVSYEVFMGLALMGIVVQVGS-------FNMR 177
           +    ++ AG +S + F  +G  R  A  ++YE  + L ++ + ++ G+        ++ 
Sbjct: 118 VPAVMLMLAGSASGSPFGGIGFSREMAIMLAYEGPILLVIVSVALKTGAALGQPICLSLS 177

Query: 178 DIVEYQAQNLWFII-----PQFFGFCTFFIAGVAVTHRHPFDQPEAEQELADGYHIEYAG 232
           +IV YQ  +  ++      P    +  F  A + ++   PFD PEAE E+ +G  IEY+G
Sbjct: 178 EIVRYQQAHGAYLFDPWMWPAVLTYIAFIPANLGIS---PFDIPEAESEVLEGPLIEYSG 234

Query: 233 MKWGMFFVGEYIGIILISALLVTLFF-GGWHGPFDILPSLAFFWFALKTAFFIMLFI-LL 290
           +  G+  +   +  +++  L + LFF  G  G F ++       FALK     +  + +L
Sbjct: 235 VALGLLKLTSAVKSVVVIGLGIVLFFPNGPEGLFGLVV------FALKCLVITVCGVSVL 288

Query: 291 RASIPRPRYDQVMDFSWKFCLPLTLINLLVTA 322
           RA++ R R DQ + F  K+   L + +L + A
Sbjct: 289 RAAVGRMRIDQAVIFYLKWPELLGIASLALVA 320