Pairwise Alignments

Query, 340 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

Subject, 342 a.a., transport system permease protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  416 bits (1068), Expect = e-121
 Identities = 218/321 (67%), Positives = 261/321 (81%), Gaps = 4/321 (1%)

Query: 16  VLVLAIMIGAAIGETSISLQVVFQVLANKLWAASYVLDPIDEGIVWNYRLTRAIVAAACG 75
           VL +A+  GAA+GE  I L  V +V+ANK+  A Y LDPIDEGI+WNYR+ RA+VAA+CG
Sbjct: 20  VLGVALAAGAALGEAPIPLVTVIEVVANKVLGAGYALDPIDEGIIWNYRVARALVAASCG 79

Query: 76  AGLAICGVVLQSLLRNPLADPYLLGISAGASTGAVLVAILGFGAGAISMSAGAFVGAVAA 135
           A LA+ GVVLQSLL N LADPY+LGISAGAS+GAV VA+LG G G +S+S GAF+GAV A
Sbjct: 80  ASLAVSGVVLQSLLLNALADPYILGISAGASSGAVAVAVLGLGGGLVSLSVGAFLGAVLA 139

Query: 136 FSLVALLA-HSSRGTTAAGQIILAGIAGSQLFNALTSFLITKSASSEQARGIMFWLLGNL 194
           F+LV+ +A  + RG  A   IILAGIAGSQLFNALTSF++TK A+++QARGIMFWLLGNL
Sbjct: 140 FALVSFIALKAGRGPAA---IILAGIAGSQLFNALTSFVVTKVATADQARGIMFWLLGNL 196

Query: 195 SGVRWHSVWLAVPTVLVGLLVCLWHRRALDAFTFGSDSAASLGIAVRRVQIILITTAALV 254
           SGVRW  V LAVP  L GL++CL++ RALDAF FG+DSAASLGI VRRV I++I  AA  
Sbjct: 197 SGVRWPDVSLAVPVALGGLVICLFYARALDAFAFGADSAASLGIPVRRVYIMMIAIAAGT 256

Query: 255 TAVMVSIVGSIGFVGLVIPHAVRMLVGVRHARLVPLSALSGALFLIAADILSRTLIKGQA 314
           TA MVSIVGSIGFVGLVIPH  R+ VGVRH +++P +AL GA+F+IAADILSR +I GQ 
Sbjct: 257 TATMVSIVGSIGFVGLVIPHVARLTVGVRHNKVLPAAALIGAIFMIAADILSRKIIPGQV 316

Query: 315 LPIGVITALIGAPVFALILTR 335
           LPIGV+TAL+GAP FALIL R
Sbjct: 317 LPIGVMTALVGAPAFALILMR 337