Pairwise Alignments

Query, 340 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

Subject, 324 a.a., bacterial transport system permease protein from Marinobacter adhaerens HP15

 Score =  195 bits (495), Expect = 2e-54
 Identities = 120/320 (37%), Positives = 190/320 (59%), Gaps = 19/320 (5%)

Query: 19  LAIMIGAAIGETSISLQVVFQVLANKLWAASYVLDPIDEGIVWNYRLTRAIVAAACGAGL 78
           LA ++  +IG TSI      +V+             + + ++   RL R + A A G  L
Sbjct: 19  LAALLSVSIGSTSIGFGDTLRVITGSG-------TELQQTLILELRLPRTLSAFATGGLL 71

Query: 79  AICGVVLQSLLRNPLADPYLLGISAGASTGAVLVAILGFGAGAISMSAGAFVGAVAAFSL 138
           A+ G ++Q LLRNPLADPY+LG+S GA+ GA+L  + G  A    +S  AF GA+ A  L
Sbjct: 72  AVAGALMQVLLRNPLADPYVLGLSGGAAVGALLAMLAG--AAGFLISGSAFAGAMLATLL 129

Query: 139 VALLAHSSRGTTAAGQIILAGIAGSQLFNALTSFLITKSASSEQARGIMFWLLGNLSGVR 198
           V  LAH S G+    +++L G+  +  + A+ + +++ + +S +  G+++WL+G+LS   
Sbjct: 130 VFGLAHGS-GSWTPSRLLLTGVVVAAGWGAMITLILSMTPAS-RLPGMLYWLMGDLSHAA 187

Query: 199 WHSVWLAVPTVLVGLLVCLWH---RRALDAFTFGSDSAASLGIAVRRVQIILITTAALVT 255
             + W   P +++ +LVCL      RAL+    GS  AA+LG++VR ++  +   A+L+T
Sbjct: 188 --TPW---PGLIILVLVCLMVFPLGRALNVLARGSLQAAALGVSVRPLEWSIYLMASLLT 242

Query: 256 AVMVSIVGSIGFVGLVIPHAVRMLVGVRHARLVPLSALSGALFLIAADILSRTLIKGQAL 315
           A  V++ GS+GFVGLVIPH +R+++G     ++P  AL+G   L+ AD L+R +I  + L
Sbjct: 243 AAAVTMAGSVGFVGLVIPHMLRLVLGNDQRLILPACALAGGTLLVLADTLARVVIAPEQL 302

Query: 316 PIGVITALIGAPVFALILTR 335
           P+GVITALIG P F  +L R
Sbjct: 303 PVGVITALIGVPTFLYLLYR 322