Pairwise Alignments

Query, 340 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

Subject, 326 a.a., transport system permease protein from Marinobacter adhaerens HP15

 Score =  196 bits (499), Expect = 5e-55
 Identities = 112/278 (40%), Positives = 157/278 (56%), Gaps = 3/278 (1%)

Query: 59  IVWNYRLTRAIVAAACGAGLAICGVVLQSLLRNPLADPYLLGISAGASTGAVLVAILGFG 118
           +VWN RL R   A   GA LA  G   Q+L RNPL  P +LG+SAGA  GAV    L   
Sbjct: 47  VVWNIRLPRVAAALLVGAALAAAGASYQALFRNPLVSPDILGVSAGAGLGAVAGIFLSLP 106

Query: 119 AGAISMSAGAFVGAVAAFSLVALLAHSSRGTTAAGQIILAGIAGSQLFNALTSFLITKSA 178
             AI   A AFVG + A   V L+A   R T     ++L G+    L  A TS L   + 
Sbjct: 107 VAAIQ--ASAFVGGMLAVGFVILVASLVRNTDRTLTLVLIGVVIGALAGAATSLLKVMAD 164

Query: 179 SSEQARGIMFWLLGNLSGVRWHSVWLAVPTVLVGLLVCLWHRRALDAFTFGSDSAASLGI 238
             +Q   I FWLLG+L+      +   +P VL+GL+     R  ++  + G + A +LGI
Sbjct: 165 PYDQLPAITFWLLGSLAATTTEDILPTLPMVLIGLVPLALLRWRINVLSLGDEEARALGI 224

Query: 239 AVRRVQIILITTAALVTAVMVSIVGSIGFVGLVIPHAVRMLVGVRHARLVPLSALSGALF 298
            V + + ++I  A L+TA + ++ G +G+VGLVIPH  RMLVG    RL+P S L GA +
Sbjct: 225 DVSKTRFLVIVAATLITASVTALAGVVGWVGLVIPHIARMLVGPGFGRLLPTSVLIGAGY 284

Query: 299 LIAADILSRTLIKGQALPIGVITALIGAPVFALILTRG 336
           L+  D L+RT+ + + +P+G++TA+IGAP F  +L RG
Sbjct: 285 LLVVDTLARTMAQVE-VPLGILTAVIGAPFFVWLLARG 321