Pairwise Alignments

Query, 540 a.a., Rhs element Vgr protein from Pseudomonas syringae pv. syringae B728a

Subject, 684 a.a., Rhs element Vgr protein from Pseudomonas stutzeri RCH2

 Score =  247 bits (630), Expect = 1e-69
 Identities = 156/480 (32%), Positives = 227/480 (47%), Gaps = 52/480 (10%)

Query: 6   QVPFMLAITDCQPDLHIINFAGHEALNETYRFDLWMIGSHPQLDVRSLLHREAFLSFGES 65
           Q  F L++   + D  ++   G EA+++ YRFDL ++     LD+ SLLHR AFL+    
Sbjct: 7   QAHFTLSLEGIEHDFKVLELQGREAISQPYRFDLELVSERSDLDLESLLHRPAFLALAPV 66

Query: 66  GGGRHGRIEHAARLHRGNRVSLYHLILVPDLQRLAQHRQRRAYQDRAIPQLIVRLLEAHG 125
           G G HG +  AA+   G R++ Y L LVP L  LA    +R +Q   +PQ+I ++LE HG
Sbjct: 67  GSGIHGLVHQAAQGESGQRLTRYRLTLVPQLAYLAHRINQRIFQHLTVPQIIAQVLEEHG 126

Query: 126 IGTNAYRFEHVNGLYPARPLHIQYDESDLHLLQRLCEEEGMHFRFEHRRSGHRLVFSDDP 185
           I  +AYRF+    +YPAR   +QYDE+DLH +QRLCEEEG+H+ F+H  SGH LVF DD 
Sbjct: 127 IQADAYRFQLGPVIYPAREYCVQYDETDLHFIQRLCEEEGIHYHFQHGASGHVLVFGDDQ 186

Query: 186 ASFPAQPLPVRFKRPQASDVPRETLLHLAERLGFPQFSRQPADHPQPAHAPSSPHDAHPL 245
             F A+     +++       +  +     RL             +P+H     +D    
Sbjct: 187 TVF-ARLAATAYQQDSGLVADQPVIKRFGLRL-----------ETRPSHVTRRDYDFEKP 234

Query: 246 TI---AANHAFQPPGLRGAISPREALSRQRG----SRGLERLRCERSDVRGQSIDTALQC 298
            +   AA H+   P L     P     R RG     R LER R +     G+S    L  
Sbjct: 235 RLSMEAAFHSDFQPDLEDYDYPGRFTERARGKHLSQRALERHRHDYELAEGESDQPQLAS 294

Query: 299 GEVIQVLDHPEPLLNDQWLLTEVVHAGRQLQVLKGAAAHDALAILRILVEAQRSSPEAEQ 358
           G  + + +HP    N  WLLTEV+H G+Q QVL+               E+  S  ++  
Sbjct: 295 GHFLPLGEHPRSDWNQLWLLTEVLHEGKQPQVLE---------------ESVTSDSQSRD 339

Query: 359 LQGNGYCNNFRVIPWATPFRPSISHPRPIVTGEHFATLQRNDNQP---DPPGYRSIRFDW 415
               GY N+F   PW  PFRP++ HP+P V G   A +     +    D  G   ++F W
Sbjct: 340 GFTQGYRNHFTATPWDIPFRPALRHPKPKVLGSQTAVVTGPAGEEIHCDEYGRVRVQFHW 399

Query: 416 HAQGPEDEPAQRW----------PVARVACPEIHRLPAGTRVRVRYLDNHPERPVICAAL 465
             +G  D+    W              +A P +     G  V V +L+  P++P++   L
Sbjct: 400 DREGQADDKTSCWLRVSSSWAGDRYGGIAIPRV-----GMEVLVTFLEGDPDQPLVTGCL 454