Pairwise Alignments

Query, 540 a.a., Rhs element Vgr protein from Pseudomonas syringae pv. syringae B728a

Subject, 707 a.a., type VI secretion system Vgr family protein from Marinobacter adhaerens HP15

 Score =  103 bits (256), Expect = 3e-26
 Identities = 112/462 (24%), Positives = 176/462 (38%), Gaps = 57/462 (12%)

Query: 22  IINFAGHEALNETYRFDLWMIGSHPQLDVRSLLHREAFLSFGESGGGRH---GRIEHAAR 78
           ++ FA  E L+E     L +  +   +   S+L +   L     G       G +   AR
Sbjct: 38  VVGFALTERLSELLHGRLDLASTDSSVGASSVLEQPIDLVIWRDGTPLRCFTGVVSEFAR 97

Query: 79  LHRGNRVSLYHLILVPDLQRLAQHRQRRAYQDRAIPQLIVRLLEAHGIGTNAYRFEHVNG 138
              G+R + Y L+  P L RLA     R +Q+R   +++  LLE  GI    +  E    
Sbjct: 98  GESGHRRTRYQLVFQPPLWRLALMHNSRIFQNRGTDEIVRTLLEERGIVDTVFDLER--- 154

Query: 139 LYPARPLHIQYDESDLHLLQRLCEEEGMHFRFEH----RRSGHRLVFSDDPASFP-AQPL 193
               R   +Q+ ESDL  ++RL  EEG H+R++H     +    LVF+D     P  + +
Sbjct: 155 RPEEREYCVQHRESDLAFVERLAAEEGWHYRYQHGSLDGQEPPALVFADHHRDSPRLEAV 214

Query: 194 PVRFKRPQASDVPRETLLHLAERLGFPQFSRQPADHPQPAHAPSSPHDAHPLTIAANHA- 252
           P   K   ++  P        +R+     + +      PA+A         L    ++  
Sbjct: 215 PYNGKAGGSTRTPCVFRFAYRKRVRPASVAMKDYTFKNPAYALMHEQSGDKLVHREDYQH 274

Query: 253 FQPPGLRGAISPREALSRQRGSRGLERLRCERSDVRGQSIDTALQCGEVIQVLDHPEPLL 312
           +  PG       ++A  R      L  LR + S   G+S       G  + + DH    +
Sbjct: 275 YDYPGR----FKQDASGRPFTEARLAALRSDASTAFGESNRPEFAPGARVPLTDHDNEAM 330

Query: 313 NDQWLLTEVVHAGRQLQVLKGAAAHDALAILRILVEAQRSSPEAEQLQGNGYCNNFRVIP 372
           N  WLLT + H G Q Q ++               E   S P         Y N+F  IP
Sbjct: 331 NRDWLLTAITHTGSQPQAVE---------------EEGGSEP-------TRYGNHFTAIP 368

Query: 373 WATPFRPSISHPRPIVTGEHFATLQRNDNQP---DPPGYRSIRFDWHAQGPEDEPAQRW- 428
               +RP   H +P++ G   A +   + +    D  G   +RF W      D+ +  W 
Sbjct: 369 ADRSWRPVCEH-KPLMDGPQMAMVTGPEGEEIHCDQYGRVKVRFPWDRYALNDQHSSAWL 427

Query: 429 ---------PVARVACPEIHRLPAGTRVRVRYLDNHPERPVI 461
                         A P I     G  V V +LD  P++P+I
Sbjct: 428 RVSQGWAGGQYGFTALPRI-----GHEVIVSFLDGDPDQPII 464