Pairwise Alignments

Query, 240 a.a., membrane protein, putative from Pseudomonas syringae pv. syringae B728a

Subject, 249 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score =  203 bits (517), Expect = 2e-57
 Identities = 112/245 (45%), Positives = 146/245 (59%), Gaps = 20/245 (8%)

Query: 1   MFKRIAYTAGFTGLLAALLLTLLQSLWVVPLIQQAETYENAPAE---------------Q 45
           +F+R+A      G L+ +LL+ +Q   V  LI QAE YE A  E               Q
Sbjct: 5   VFRRMASAVVVAGALSGVLLSGVQQFQVEKLILQAEQYEKAAEEGASAAPQAAHEHEHDQ 64

Query: 46  LHQHADGAVAEHSHTHDEAAWEPENGWQRVLSTTGGNLVVAVGFALMLAGLYTLRAPGRT 105
            H+HA  +   H H+HD  AWEP +G +R   T   N+ +AVGFAL+L    TL   GR 
Sbjct: 65  AHEHAAASAHAHEHSHDADAWEPADGAERTGYTVLANVSMAVGFALLLVAAITLS--GRQ 122

Query: 106 VQ---GAWWGLAGFAVFVLAPTLGLPPELPGTAAAELSQRQLWWLGAAASTAAGLALLVF 162
           V    G  WGLAG+ VF +AP+LGLPPE+PGT AA L  RQ WW+  A  TAA L L VF
Sbjct: 123 VSWRSGLLWGLAGYGVFFVAPSLGLPPEVPGTLAAPLQARQFWWVMTAVMTAASLGLFVF 182

Query: 163 GQNWLLKALGVAILLVPHVLGAPQPLVHESLAPEALESQFMMASLLTNALFWVALGLISA 222
            + W  K L VA+L+VPH++GAPQP VH  +APE L   F+ A+ L NA+FW+ALG ++ 
Sbjct: 183 TRAWWCKLLAVALLVVPHLVGAPQPEVHGGVAPEELAHAFIRATALANAVFWLALGGLTG 242

Query: 223 WLFRR 227
           + +RR
Sbjct: 243 FFYRR 247